RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ACAT2Q9BWD1 397 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 NLNQ9BYT8 704 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 RAB6CQ9H0N0 254 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 KCNJ16Q9NPI9 418 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 RBAKQ9NYW8 714 aaPredicted RBP5.17□□□□□ -1.58
RTF1-204ENST00000558117 LARSQ9P2J5 1176 aaKnown RBP5.17□□□□□ -1.58
RTF1-204ENST00000558117 IL36AQ9UHA7 158 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 CMAHPQ9Y471 501 aa5.17□□□□□ -1.58
RTF1-204ENST00000558117 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 hCG_1809904A0A1W2PP81 198 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 A0A1W2PPE2 198 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 A0A1W2PR64 198 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 FAM72CH0Y354 149 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 H0YAE9 185 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 J3QR06 171 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 K7ERQ8 282 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 TLX2O43763 284 aaPredicted RBP5.16□□□□□ -1.58
RTF1-204ENST00000558117 TM7SF2O76062 418 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 PLGP00747 810 aaPredicted RBP5.16□□□□□ -1.58
RTF1-204ENST00000558117 C9P02748 559 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 HLA-DPA1P20036 260 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 CPT2P23786 658 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 AK4P27144 223 aaPredicted RBP5.16□□□□□ -1.58
RTF1-204ENST00000558117 PON1P27169 355 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 ADORA2BP29275 332 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 HOXA1P49639 335 aaPredicted RBP5.16□□□□□ -1.58
RTF1-204ENST00000558117 GFERP55789 205 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 EVCP57679 992 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 GTF2BQ00403 316 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 NFE2L1Q14494 772 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 KRBOX4Q5JUW0 171 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 SIRPB2Q5JXA9 342 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.16□□□□□ -1.58
RTF1-204ENST00000558117 ARMC4Q5T2S8 1044 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 FAM72AQ5TYM5 149 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 FAM72DQ6L9T8 149 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 CAVIN1Q6NZI2 390 aaKnown RBP5.16□□□□□ -1.58
RTF1-204ENST00000558117 PET117Q6UWS5 81 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 C3P1Q6ZMU1 363 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 BTN2A1Q7KYR7 527 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 MARK2Q7KZI7 788 aaKnown RBP5.16□□□□□ -1.58
RTF1-204ENST00000558117 NLRP14Q86W24 1093 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 FAM72BQ86X60 149 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 DOLPP1Q86YN1 238 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 RAB43Q86YS6 212 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 CLYBLQ8N0X4 340 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 CRYBG2Q8N1P7 616 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 ARHGAP18Q8N392 663 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 GCSAMQ8N6F7 178 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 KRT35Q92764 455 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 RAB7BQ96AH8 199 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 ANKRD36BP1Q96IX9 119 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 MAGED4Q96JG8 741 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 NUDCD1Q96RS6 583 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 FUT8Q9BYC5 575 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 SMYD3Q9H7B4 428 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 FAM49BQ9NUQ9 324 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 TBK1Q9UHD2 729 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 FAF1Q9UNN5 650 aaPredicted RBP5.16□□□□□ -1.58
RTF1-204ENST00000558117 HS3ST2Q9Y278 367 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 OR51B4Q9Y5P0 310 aa5.16□□□□□ -1.58
RTF1-204ENST00000558117 LOC100653049A0A140TA62 436 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 OR2A25A4D2G3 310 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 CTDSP2O14595 271 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 ZNF821O75541 412 aaPredicted RBP5.15□□□□□ -1.59
RTF1-204ENST00000558117 KRT34O76011 436 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 IGHEP01854 428 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 PTAFRP25105 342 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 CHRNB4P30926 498 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 OTX2P32243 289 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 KIAA1024LP59773 190 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 TNNC1P63316 161 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 ACTN3Q08043 901 aaPredicted RBP5.15□□□□□ -1.59
RTF1-204ENST00000558117 UBE2V1Q13404 147 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 CAMK2DQ13557 499 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 CAPRIN1Q14444 709 aaKnown RBP5.15□□□□□ -1.59
RTF1-204ENST00000558117 SUSD1Q6UWL2 747 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 PLXDC2Q6UX71 529 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 MARVELD2Q8N4S9 558 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 OR52K2Q8NGK3 314 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 CCDC114Q96M63 670 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 DACH2Q96NX9 599 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 IP6K3Q96PC2 410 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 ATP6V0BQ99437 205 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 GSDMCQ9BYG8 508 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 LSG1Q9H089 658 aaKnown RBP5.15□□□□□ -1.59
RTF1-204ENST00000558117 SDCBP2Q9H190 292 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 RAD21L1Q9H4I0 556 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 YAE1D1Q9NRH1 226 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 FAM118AQ9NWS6 357 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 HPF1Q9NWY4 346 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 MOSPD1Q9UJG1 213 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 RNF6Q9Y252 685 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.59
RTF1-204ENST00000558117 O00370 1275 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 TOX3O15405 576 aaPredicted RBP5.14□□□□□ -1.59
RTF1-204ENST00000558117 CD5LO43866 347 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 SMPD2O60906 423 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 KERAO60938 352 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 TNNC2P02585 160 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms