RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 LOC100653049A0A140TA62 436 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 A0A1W2PS18 150 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 SMCO3A2RU48 225 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 OR2AG2A6NM03 316 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 CYB561D2O14569 222 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 OR7A17O14581 309 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 RNF113AO15541 343 aaKnown RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 PRKNO60260 465 aaPredicted RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 LRCH4O75427 683 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 KRT34O76011 436 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 ECDO95905 644 aaPredicted RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 LGI1O95970 557 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 IGHV4-59P01825 116 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 FTH1P02794 183 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 EDN1P05305 212 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 CRYGBP07316 175 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 CCDC172P0C7W6 258 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 IGHV4-38-2P0DP08 117 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 MCF2P10911 925 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 ACADSP16219 412 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 NCK1P16333 377 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 PRKACAP17612 351 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 PGCP20142 388 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 CASP14P31944 242 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 HPCAL1P37235 193 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 SLC11A1P49279 550 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 PGFP49763 221 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 HADHBP55084 474 aaKnown RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 EWSR1Q01844 656 aaKnown RBP eCLIP3.32□□□□□ -1.88
TDP1-217ENST00000557782 CDR2Q01850 454 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 ENPEPQ07075 957 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 ENPP2Q13822 863 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 SRSF7Q16629 238 aaKnown RBP eCLIP3.32□□□□□ -1.88
TDP1-217ENST00000557782 SFT2D3Q587I9 215 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 FAM76BQ5HYJ3 339 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 PDZK1Q5T2W1 519 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 AGAP7PQ5VUJ5 663 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 BHLHB9Q6PI77 547 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 MOB3BQ86TA1 216 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 METTL27Q8N6F8 245 aaPredicted RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 FAM83FQ8NEG4 500 aaPredicted RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 DMBX1Q8NFW5 382 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 OR51G2Q8NGK0 314 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 LIPHQ8WWY8 451 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 SLC38A4Q969I6 547 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 ADIPOR1Q96A54 375 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 TADA1Q96BN2 335 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 C10orf35Q96D05 121 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 SDSLQ96GA7 329 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 CAPNS2Q96L46 248 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 NSMCE3Q96MG7 304 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 AGAP3Q96P47 875 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 AGAP4Q96P64 663 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 CPXM1Q96SM3 734 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 FUCA2Q9BTY2 467 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 RPP25Q9BUL9 199 aaKnown RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 PINK1Q9BXM7 581 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 COMMD4Q9H0A8 199 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 DNTTIP1Q9H147 329 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 GLT8D2Q9H1C3 349 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 SLC25A51Q9H1U9 297 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 LRRN3Q9H3W5 708 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 GEMIN7Q9H840 131 aaKnown RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 VCPKMTQ9H867 229 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 GPN2Q9H9Y4 310 aaPredicted RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 NRN1Q9NPD7 142 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 POLE4Q9NR33 117 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 MRPL22Q9NWU5 206 aaKnown RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 KLHL28Q9NXS3 571 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 MRPL39Q9NYK5 338 aaKnown RBP3.32□□□□□ -1.88
TDP1-217ENST00000557782 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.32□□□□□ -1.88
TDP1-217ENST00000557782 ABCG2Q9UNQ0 655 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 DHRS7Q9Y394 339 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 PHLPP2Q6ZVD8 1323 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 SAA2-SAA4A0A096LPE2 208 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 NPIPA5A0A0B4J1W7 369 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 OR5H15A6NDH6 313 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 ACOD1A6NK06 481 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 FAM74A7A6NL05 159 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 NPIPA5E9PKD4 350 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 H3BNX3 289 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 GOLGA8TH3BQL2 631 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 SOCS2O14508 198 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 NVLO15381 856 aaKnown RBP3.31□□□□□ -1.88
TDP1-217ENST00000557782 AKR7A2O43488 359 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CHMP2AO43633 222 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 TOXO94900 526 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 LRATO95237 230 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CLDN9O95484 217 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 SEC24AO95486 1093 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 IGSF6O95976 241 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CELA2AP08217 269 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 FRMD6-AS1P0C7T7 363 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 ZNF12P17014 697 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CPN2P22792 545 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CEACAM8P31997 349 aaPredicted RBP3.31□□□□□ -1.88
TDP1-217ENST00000557782 LONP1P36776 959 aaKnown RBP3.31□□□□□ -1.88
TDP1-217ENST00000557782 ZFP36L2P47974 494 aaKnown RBP3.31□□□□□ -1.88
TDP1-217ENST00000557782 EMDP50402 254 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 RAB9AP51151 201 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms