RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MED11Q9P086 117 aa11.06□□□□□ -0.64
PSEN1-220ENST00000557037 HEATR1Q9H583 2144 aaKnown RBP11.06□□□□□ -0.64
PSEN1-220ENST00000557037 SHISA8B8ZZ34 492 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 MFAP3LO75121 409 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 NR2F6P10588 404 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 PCNAP12004 261 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 S1PR1P21453 382 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 APEX1P27695 318 aaKnown RBP11.05□□□□□ -0.64
PSEN1-220ENST00000557037 GABRB3P28472 473 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 LIMS1P48059 325 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 GAS1P54826 345 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 SLMAPQ14BN4 828 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 FBXO48Q5FWF7 155 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 C6orf163Q5TEZ5 329 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 TFAP2EQ6VUC0 442 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 DEF8Q6ZN54 512 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 NUFIP2Q7Z417 695 aaKnown RBP11.05□□□□□ -0.64
PSEN1-220ENST00000557037 GGNQ86UU5 652 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 RNF175Q8N4F7 328 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 OR7G1Q8NGA0 311 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 OR52B6Q8NGF0 335 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 CALML6Q8TD86 181 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 ADOQ96SZ5 270 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 NAP1L3Q99457 506 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-220ENST00000557037 TRMOQ9BU70 441 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 PPP4R1LQ9P1A2 415 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 SLC17A6Q9P2U8 582 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 ASIC3Q9UHC3 531 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 MCTS1Q9ULC4 181 aaKnown RBP11.05□□□□□ -0.64
PSEN1-220ENST00000557037 WBP11Q9Y2W2 641 aaKnown RBP11.05□□□□□ -0.64
PSEN1-220ENST00000557037 FKBP7Q9Y680 259 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 PMF1-BGLAPU3KQ54 211 aa11.05□□□□□ -0.64
PSEN1-220ENST00000557037 NPIPA5A0A0B4J1W7 369 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 LOC390937A0A1W2PQ73 354 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 NCF1BA6NI72 391 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-220ENST00000557037 SDR42E2A6NKP2 422 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 NCF1CA8MVU1 366 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-220ENST00000557037 ESPNB1AK53 854 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 NPIPA7E9PJI5 369 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 PGRMC2O15173 223 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 ACOX3O15254 700 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 SCO2O43819 266 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 CXCL13O43927 109 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 LYZL6O75951 148 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 SYNGR4O95473 234 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 NPIPA8P0DM63 369 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 BMP4P12644 408 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 NCF1P14598 390 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-220ENST00000557037 RAP1GDS1P52306 607 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 ARFIP2P53365 341 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 TPM4P67936 248 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 CHRNB3Q05901 458 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 STX5Q13190 355 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 LGSNQ5TDP6 509 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 KHDRBS2Q5VWX1 349 aaKnown RBP11.04□□□□□ -0.64
PSEN1-220ENST00000557037 FAM111BQ6SJ93 734 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 GALNT10Q86SR1 603 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 UBL4BQ8N7F7 174 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 GBP7Q8N8V2 638 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-220ENST00000557037 OR2M3Q8NG83 312 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 OR10D3Q8NH80 312 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 PTCD3Q96EY7 689 aaKnown RBP11.04□□□□□ -0.64
PSEN1-220ENST00000557037 RADILQ96JH8 1075 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 SORCS2Q96PQ0 1159 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 FAM167BQ9BTA0 163 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 GLRX2Q9NS18 164 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 AP4B1Q9Y6B7 739 aa11.04□□□□□ -0.64
PSEN1-220ENST00000557037 OR6C70A6NIJ9 312 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 TMPRSS11DO60235 418 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 CLDN9O95484 217 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 TPSB2P20231 275 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 PIK3R1P27986 724 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 HNMTP50135 292 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 CDH15P55291 814 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 SCGB2A2Q13296 93 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 ITGADQ13349 1161 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 DDX39BQ13838 428 aaKnown RBP11.03□□□□□ -0.64
PSEN1-220ENST00000557037 ACAP2Q15057 778 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 TPSAB1Q15661 275 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 HIST2H2ACQ16777 129 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-220ENST00000557037 FBLN7Q53RD9 439 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 HIST2H2AA3Q6FI13 130 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 SHQ1Q6PI26 577 aaKnown RBP11.03□□□□□ -0.64
PSEN1-220ENST00000557037 EXOC3L1Q86VI1 746 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 LMNTD2Q8IXW0 634 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 ANKS4BQ8N8V4 417 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 FADS6Q8N9I5 356 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 LRRC57Q8N9N7 239 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 C2CD4AQ8NCU7 369 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-220ENST00000557037 FBF1Q8TES7 1133 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 ESAMQ96AP7 390 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 RGMAQ96B86 450 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 MUCL1Q96DR8 90 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 SNX18Q96RF0 628 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 WDR41Q9HAD4 459 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 ZBTB26Q9HCK0 441 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 SMYD2Q9NRG4 433 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 GPRC5BQ9NZH0 403 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 ASB4Q9Y574 426 aa11.03□□□□□ -0.64
PSEN1-220ENST00000557037 PTGDR2Q9Y5Y4 395 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms