RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 A0A1B0GVC2 190 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 A0A1W2PRB8 838 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 OR14I1A6ND48 311 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 E9PLN8 166 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 AQP7O14520 342 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 SDHDO14521 159 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 ADAM10O14672 748 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 GNB5O14775 395 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 SNPHO15079 494 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 SUSD5O60279 629 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 HCN1O60741 890 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 ELAVL4P26378 380 aaKnown RBP12.54□□□□□ -0.4
SHMT2-219ENST00000555563 TRPC1P48995 793 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 MAN2A2P49641 1150 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 PRKAG1P54619 331 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 CLDN8P56748 225 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 OCRLQ01968 901 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 SNTA1Q13424 505 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 GAB1Q13480 694 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 EFR3AQ14156 821 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 MLC1Q15049 377 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 CYP27C1Q4G0S4 372 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 EMC4Q5J8M3 183 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 ATG16L1Q676U5 607 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 TIGD3Q6B0B8 471 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 SLC30A6Q6NXT4 461 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 RPTNQ6XPR3 784 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 HDXQ7Z353 690 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 TRIM42Q8IWZ5 723 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 NUP43Q8NFH3 380 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 FBXO30Q8TB52 745 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 HOXB13Q92826 284 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-219ENST00000555563 COQ8BQ96D53 544 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 GIMAP5Q96F15 307 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 GNRHR2Q96P88 292 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 DMRTA2Q96SC8 542 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 VKORC1Q9BQB6 163 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 EXO5Q9H790 373 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 MANSC1Q9H8J5 431 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 ACKR4Q9NPB9 350 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 PNPLA3Q9NST1 481 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 CBLCQ9ULV8 474 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 MAPRE3Q9UPY8 281 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 WIF1Q9Y5W5 379 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 DIDO1Q9BTC0 2240 aaKnown RBP12.54□□□□□ -0.4
SHMT2-219ENST00000555563 ZNF407Q9C0G0 2248 aa12.54□□□□□ -0.4
SHMT2-219ENST00000555563 NINQ8N4C6 2090 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 GXYLT2A0PJZ3 443 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 TTC36A6NLP5 189 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 BCKDKO14874 412 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 HDAC3O15379 428 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 EMC8O43402 210 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 C6orf47O95873 294 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 KITP10721 976 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 CYP4B1P13584 511 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 LBPP18428 481 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 PTPN6P29350 595 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 GABRA3P34903 492 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 PNLIPRP2P54317 469 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 MFSD12Q6NUT3 480 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 CAMKMTQ7Z624 323 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 MRGPRGQ86SM5 289 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 LRRC34Q8IZ02 419 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 EID3Q8N140 333 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 RPRMLQ8N4K4 120 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 MARVELD2Q8N4S9 558 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 OR5M9Q8NGP3 310 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 OR1J4Q8NGS1 313 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 PHF10Q8WUB8 498 aaKnown RBP12.53□□□□□ -0.4
SHMT2-219ENST00000555563 RNF138Q8WVD3 245 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 OR5P2Q8WZ92 322 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 PIK3R3Q92569 461 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 FAM120BQ96EK7 910 aaKnown RBP12.53□□□□□ -0.4
SHMT2-219ENST00000555563 RMND5BQ96G75 393 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-219ENST00000555563 PRPF18Q99633 342 aaKnown RBP12.53□□□□□ -0.4
SHMT2-219ENST00000555563 SH3GL2Q99962 352 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 DUSP26Q9BV47 211 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 BHLHE41Q9C0J9 482 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-219ENST00000555563 TP63Q9H3D4 680 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-219ENST00000555563 VIPAS39Q9H9C1 493 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 C3orf14Q9HBI5 128 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 SERHLQ9NQF3 203 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 ZCCHC3Q9NUD5 404 aaKnown RBP12.53□□□□□ -0.4
SHMT2-219ENST00000555563 FLRT3Q9NZU0 649 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 SNX8Q9Y5X2 465 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 GTF3C1Q12789 2109 aa12.53□□□□□ -0.4
SHMT2-219ENST00000555563 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.4
SHMT2-219ENST00000555563 USP9YO00507 2555 aaPredicted RBP12.52□□□□□ -0.4
SHMT2-219ENST00000555563 MYO7BQ6PIF6 2116 aa12.52□□□□□ -0.4
SHMT2-219ENST00000555563 GOLGA8QA0A0J9YX86 632 aa12.52□□□□□ -0.41
SHMT2-219ENST00000555563 GOLGA8OA6NCC3 632 aa12.52□□□□□ -0.41
SHMT2-219ENST00000555563 C17orf51A8MQB3 221 aa12.52□□□□□ -0.41
SHMT2-219ENST00000555563 GOLGA8NF8WBI6 632 aa12.52□□□□□ -0.41
SHMT2-219ENST00000555563 KLF11O14901 512 aa12.52□□□□□ -0.41
SHMT2-219ENST00000555563 ANKRD28O15084 1053 aa12.52□□□□□ -0.41
SHMT2-219ENST00000555563 SCO2O43819 266 aa12.52□□□□□ -0.41
SHMT2-219ENST00000555563 TRAPPC6AO75865 159 aa12.52□□□□□ -0.41
SHMT2-219ENST00000555563 NKX2-2O95096 273 aa12.52□□□□□ -0.41
SHMT2-219ENST00000555563 IGKV1D-16P01601 117 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms