RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 RNPEPL1Q9HAU8 725 aa9.46□□□□□ -0.9
SRP54-208ENST00000555557 CCM2LQ9NUG4 571 aaPredicted RBP9.46□□□□□ -0.9
SRP54-208ENST00000555557 COPS7AQ9UBW8 275 aa9.46□□□□□ -0.9
SRP54-208ENST00000555557 PRODH2Q9UF12 536 aa9.46□□□□□ -0.9
SRP54-208ENST00000555557 C19orf25Q9UFG5 118 aaPredicted RBP9.46□□□□□ -0.9
SRP54-208ENST00000555557 ANAPC2Q9UJX6 822 aa9.46□□□□□ -0.9
SRP54-208ENST00000555557 AP4S1Q9Y587 144 aa9.46□□□□□ -0.9
SRP54-208ENST00000555557 PTPRBP23467 1997 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 LOC102723996A0A087X1L8 192 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 IGHV1-45A0A0A0MS14 117 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 NPIPA5A0A0B4J1W7 369 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 C2orf92A0A1B0GVN3 265 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 NPIPA7E9PJI5 369 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 SOCS6O14544 535 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 TIPRLO75663 272 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 KCNK2O95069 426 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 AGR2O95994 175 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 IGKV1D-16P01601 117 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 NPIPA8P0DM63 369 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 SPINK2P20155 84 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 PAX7P23759 505 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 MMP11P24347 488 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 SLC7A1P30825 629 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 RNF144AP50876 292 aaPredicted RBP9.45□□□□□ -0.9
SRP54-208ENST00000555557 SESN3P58005 492 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 SLC26A5P58743 744 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 AP2B1P63010 937 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 POU6F2P78424 691 aaPredicted RBP9.45□□□□□ -0.9
SRP54-208ENST00000555557 TXNL4AP83876 142 aaKnown RBP9.45□□□□□ -0.9
SRP54-208ENST00000555557 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 EBPQ15125 230 aaKnown RBP9.45□□□□□ -0.9
SRP54-208ENST00000555557 GPR68Q15743 365 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 DUSP7Q16829 419 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 TBCELQ5QJ74 424 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 AAGABQ6PD74 315 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 FRRS1Q6ZNA5 592 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 C16orf47Q6ZP98 133 aaPredicted RBP9.45□□□□□ -0.9
SRP54-208ENST00000555557 FKBP9P1Q75LS8 142 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 EIF3MQ7L2H7 374 aaKnown RBP9.45□□□□□ -0.9
SRP54-208ENST00000555557 IL22RA1Q8N6P7 574 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 ADIPOR1Q96A54 375 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 PYURFQ96I23 114 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 HSH2DQ96JZ2 352 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 ART5Q96L15 291 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 BTBD2Q9BX70 525 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 NXF5Q9H1B4 397 aaKnown RBP9.45□□□□□ -0.9
SRP54-208ENST00000555557 IL17BQ9UHF5 180 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 SAMD4AQ9UPU9 718 aaKnown RBP9.45□□□□□ -0.9
SRP54-208ENST00000555557 LIPT1Q9Y234 373 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 PADI2Q9Y2J8 665 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 GPR55Q9Y2T6 319 aaPredicted RBP9.45□□□□□ -0.9
SRP54-208ENST00000555557 OR10H1Q9Y4A9 318 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 PCDHGB3Q9Y5G1 929 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 AK5Q9Y6K8 562 aa9.45□□□□□ -0.9
SRP54-208ENST00000555557 A0A0G2JPF8 293 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 CENPVL1A0A0U1RR11 272 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 HNRNPCL2B2RXH8 293 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 HNRNPCL3B7ZW38 293 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 TERTO14746 1132 aaKnown RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 SUV39H1O43463 412 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 MFN2O95140 757 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 GPIP06744 558 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 CELA2AP08217 269 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 CD63P08962 238 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 HNRNPCL4P0DMR1 293 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 UMPSP11172 480 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 COX6A1P12074 109 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 ANPEPP15144 967 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 NR0B1P51843 470 aaKnown RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 SELENOWP63302 87 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 RNF4P78317 190 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 HPCAP84074 193 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 FOXC1Q12948 553 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 MTX3Q5HYI7 312 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 TYW3Q6IPR3 259 aaKnown RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 LRRC74BQ6ZQY2 392 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 PPP1R32Q7Z5V6 425 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 PATL1Q86TB9 770 aaKnown RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 DTX1Q86Y01 620 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 SLC30A8Q8IWU4 369 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 PRR22Q8IZ63 422 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 EID3Q8N140 333 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 LILRA2Q8N149 483 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 METTL25Q8N6Q8 603 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 CHDHQ8NE62 594 aaPredicted RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 OR11G2Q8NGC1 345 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 LRTOMTQ8WZ04 291 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 SLC47A1Q96FL8 570 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 DUS3LQ96G46 650 aaKnown RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 ZNF607Q96SK3 696 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 PKP2Q99959 881 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 CHID1Q9BWS9 393 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 UGT2B28Q9BY64 529 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 B3GNT4Q9C0J1 378 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 WWTR1Q9GZV5 400 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 BCL2L10Q9HD36 194 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 Q9N2J8 555 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 OLAHQ9NV23 265 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 ADPRHL2Q9NX46 363 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 RPS6KA6Q9UK32 745 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms