RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 STK19P49842 368 aaPredicted RBP2.02□□□□□ -2.09
SNX6-204ENST00000555541 SMSP52788 366 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 RAG2P55895 527 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 YWHAHQ04917 246 aaPredicted RBP2.02□□□□□ -2.09
SNX6-204ENST00000555541 SCARB2Q14108 478 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 KCTD19Q17RG1 926 aaPredicted RBP2.02□□□□□ -2.09
SNX6-204ENST00000555541 DCST2Q5T1A1 773 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 ZNF691Q5VV52 312 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 ZNF57Q68EA5 555 aaPredicted RBP2.02□□□□□ -2.09
SNX6-204ENST00000555541 HIST2H2AA3Q6FI13 130 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 CXCL17Q6UXB2 119 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 FRA10AC1Q70Z53 315 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 KCTD9Q7L273 389 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.02□□□□□ -2.09
SNX6-204ENST00000555541 TPRX1Q8N7U7 411 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 HIST1H2ACQ93077 130 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 KRTAP4-1Q9BYQ7 146 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 GLT8D2Q9H1C3 349 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 ABCG8Q9H221 673 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 GLIPR2Q9H4G4 154 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 PTGES2Q9H7Z7 377 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 ZCCHC3Q9NUD5 404 aaKnown RBP2.02□□□□□ -2.09
SNX6-204ENST00000555541 MAD2L2Q9UI95 211 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 ENTPD4Q9Y227 616 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 DHRS7Q9Y394 339 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 RLFQ13129 1914 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 USP6P35125 1406 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 A0A1B0GUA9 196 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 NPIPA2E9PIF3 369 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 TIMP1P01033 207 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 APRTP07741 180 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 TCF7P36402 384 aaPredicted RBP2.01□□□□□ -2.09
SNX6-204ENST00000555541 SGSHP51688 502 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 STX1BP61266 288 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 OC90Q02509 493 aaPredicted RBP2.01□□□□□ -2.09
SNX6-204ENST00000555541 DAZ2Q13117 558 aaKnown RBP2.01□□□□□ -2.09
SNX6-204ENST00000555541 SHHQ15465 462 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 ZKSCAN8Q15776 578 aaPredicted RBP2.01□□□□□ -2.09
SNX6-204ENST00000555541 IFI44LQ53G44 452 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 EOGTQ5NDL2 527 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 ASPHD2Q6ICH7 369 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 SULT1C3Q6IMI6 304 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 CWC27Q6UX04 472 aaKnown RBP2.01□□□□□ -2.09
SNX6-204ENST00000555541 B3GLCTQ6Y288 498 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 SYVN1Q86TM6 617 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 CSNK1A1LQ8N752 337 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 DCAF4L2Q8NA75 395 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 GOT1L1Q8NHS2 421 aaPredicted RBP2.01□□□□□ -2.09
SNX6-204ENST00000555541 NLNQ9BYT8 704 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 OSBPL8Q9BZF1 889 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 AKIRIN1Q9H9L7 192 aaPredicted RBP2.01□□□□□ -2.09
SNX6-204ENST00000555541 COPS7BQ9H9Q2 264 aaPredicted RBP2.01□□□□□ -2.09
SNX6-204ENST00000555541 DAZ3Q9NR90 486 aaKnown RBP2.01□□□□□ -2.09
SNX6-204ENST00000555541 MBD2Q9UBB5 411 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 PPIAL4AQ9Y536 164 aa2.01□□□□□ -2.09
SNX6-204ENST00000555541 A0A1W2PQ67 120 aa2□□□□□ -2.09
SNX6-204ENST00000555541 NPY2RP49146 381 aa2□□□□□ -2.09
SNX6-204ENST00000555541 GPC3P51654 580 aa2□□□□□ -2.09
SNX6-204ENST00000555541 OTUD4Q01804 1114 aaKnown RBP2□□□□□ -2.09
SNX6-204ENST00000555541 UBXN1Q04323 297 aa2□□□□□ -2.09
SNX6-204ENST00000555541 EGFEM1PQ0D2K5 195 aa2□□□□□ -2.09
SNX6-204ENST00000555541 DPYSQ14117 519 aa2□□□□□ -2.09
SNX6-204ENST00000555541 CYB5R2Q6BCY4 276 aa2□□□□□ -2.09
SNX6-204ENST00000555541 DPY19L2P2Q6ZN68 376 aa2□□□□□ -2.09
SNX6-204ENST00000555541 PARGQ86W56 976 aa2□□□□□ -2.09
SNX6-204ENST00000555541 PPP1R27Q86WC6 154 aa2□□□□□ -2.09
SNX6-204ENST00000555541 MLKLQ8NB16 471 aa2□□□□□ -2.09
SNX6-204ENST00000555541 RNASE8Q8TDE3 154 aaKnown RBP2□□□□□ -2.09
SNX6-204ENST00000555541 TMEM37Q8WXS4 190 aa2□□□□□ -2.09
SNX6-204ENST00000555541 SMIM14Q96QK8 99 aa2□□□□□ -2.09
SNX6-204ENST00000555541 EHFQ9NZC4 300 aa2□□□□□ -2.09
SNX6-204ENST00000555541 ONECUT1Q9UBC0 465 aa2□□□□□ -2.09
SNX6-204ENST00000555541 MIOXQ9UGB7 285 aa2□□□□□ -2.09
SNX6-204ENST00000555541 NPC1L1Q9UHC9 1359 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 ASTN1O14525 1302 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 IGKV2D-24A0A075B6R9 120 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 ABCD4O14678 606 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 SNAI2O43623 268 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 BUB1O43683 1085 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 TOXO94900 526 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 STSP08842 583 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 FERP16591 822 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 HNRNPA2B1P22626 353 aaKnown RBP1.99□□□□□ -2.09
SNX6-204ENST00000555541 CTNNB1P35222 781 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 NSFP46459 744 aaKnown RBP1.99□□□□□ -2.09
SNX6-204ENST00000555541 RAB35Q15286 201 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 CYP51A1Q16850 503 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 ZNF630Q2M218 657 aaPredicted RBP1.99□□□□□ -2.09
SNX6-204ENST00000555541 ZNF699Q32M78 642 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 AARDQ4LEZ3 155 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 OR5M10Q6IEU7 315 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 C11orf88Q6PI97 169 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 ZNF561Q8N587 486 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 COLGALT1Q8NBJ5 622 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 ZNF397Q8NF99 534 aaPredicted RBP1.99□□□□□ -2.09
SNX6-204ENST00000555541 NEIL2Q969S2 332 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 TSPAN18Q96SJ8 248 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 NTN4Q9HB63 628 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 MARCH5Q9NX47 278 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 TERF2IPQ9NYB0 399 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms