RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 WASHC1A8K0Z3 465 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 E9PAM4 449 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 SMPD2O60906 423 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 KBTBD11O94819 623 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 IGHV3-9P01782 118 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 GSTT2P0CG29 244 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 GSTT2BP0CG30 244 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 NCF1P14598 390 aaPredicted RBP4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 UQCRBP14927 111 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 PVRP15151 417 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 ACADSP16219 412 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 CAPN2P17655 700 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 HPDP32754 393 aaPredicted RBP4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 ADRA1AP35348 466 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 ACAA2P42765 397 aaKnown RBP4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 TRPC1P48995 793 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 EMDP50402 254 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 KRTAP10-9P60411 292 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 OSTNP61366 133 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZNF33BQ06732 778 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZFP36L1Q07352 338 aaKnown RBP4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 RFTN1Q14699 578 aaPredicted RBP4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZIC1Q15915 447 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 LPAL2Q16609 132 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 DCAF4L1Q3SXM0 396 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 CYBRD1Q53TN4 286 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 MS4A13Q5J8X5 152 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZNF311Q5JNZ3 666 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 REG3GQ6UW15 175 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 Q7L0L9 218 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 EFCAB13Q8IY85 973 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 SLC22A18ASQ8N1D0 253 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 SUMF1Q8NBK3 374 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 FAM222BQ8WU58 562 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZBED6CLQ96FA7 236 aaPredicted RBP4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 ELMO2Q96JJ3 720 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 VPS35Q96QK1 796 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 TBCDQ9BTW9 1192 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 RPP25Q9BUL9 199 aaKnown RBP4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 COQ10BQ9H8M1 238 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 C1orf123Q9NWV4 160 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZNF581Q9P0T4 197 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 EIF3LQ9Y262 564 aaKnown RBP4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 EXOSC1Q9Y3B2 195 aaKnown RBP4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 RNF115Q9Y4L5 304 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 CSAG2Q9Y5P2 127 aa4.26□□□□□ -1.73
CKS1BP1-201ENST00000555221 A0A1B0GUL7 405 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 NDC80O14777 642 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 LANCL1O43813 399 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 TBX6O95947 436 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 WNT2P09544 360 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 FAM200BP0CF97 657 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 FOLR2P14207 255 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 GATA1P15976 413 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 IGFBP5P24593 272 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 PTGFRP43088 359 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 PTGER3P43115 390 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 RAB35Q15286 201 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 CDKN3Q16667 212 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 MICAQ29983 383 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 TMEM41BQ5BJD5 291 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 RIPPLY2Q5TAB7 128 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 PNCKQ6P2M8 343 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 NIPAL3Q6P499 406 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 HACD2Q6Y1H2 254 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 HIPK1Q86Z02 1210 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 CBWD2Q8IUF1 395 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 OR6T1Q8NGN1 323 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 FNDC8Q8TC99 324 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 ART4Q93070 314 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 SYAP1Q96A49 352 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 TADA1Q96BN2 335 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 DNAJA3Q96EY1 480 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 C11orf24Q96F05 449 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 THUMPD2Q9BTF0 503 aaKnown RBP4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZNF416Q9BWM5 594 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 WDR76Q9H967 626 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 IMPAD1Q9NX62 359 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 GALPQ9UBC7 116 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 RNF6Q9Y252 685 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 CCDC7Q96M83 1385 aa4.25□□□□□ -1.73
CKS1BP1-201ENST00000555221 IFT140Q96RY7 1462 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 SOGA1O94964 1423 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 WRNQ14191 1432 aaPredicted RBP eCLIP4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 LRRC30A6NM36 301 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 CRLF1O75462 422 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 MFN2O95140 757 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 PRAMEF12O95522 483 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 ANP32DO95626 131 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 GUCA1CO95843 209 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 HMGCS2P54868 508 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 PPP1R3AQ16821 1122 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 DNAJC21Q5F1R6 531 aaKnown RBP4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 BTNL3Q6UXE8 466 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 TMEM184AQ6ZMB5 413 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 CENPUQ71F23 418 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 ERASQ7Z444 233 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 MYPOPQ86VE0 399 aaPredicted RBP4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 ZNF573Q86YE8 665 aa4.24□□□□□ -1.73
CKS1BP1-201ENST00000555221 CENPLQ8N0S6 344 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms