RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 SNPHO15079 494 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 CTIFO43310 598 aaKnown RBP10.47□□□□□ -0.73
TUBB3-204ENST00000554116 ZNF500O60304 480 aaPredicted RBP10.47□□□□□ -0.73
TUBB3-204ENST00000554116 PLIN3O60664 434 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 UGT2B11O75310 529 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 PPM1BO75688 479 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 SLU7O95391 586 aaKnown RBP10.47□□□□□ -0.73
TUBB3-204ENST00000554116 ESRRBO95718 433 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 HSD3B1P14060 373 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 HSD3B2P26439 372 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 PIK3R1P27986 724 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 MASP1P48740 699 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 XKP51811 444 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 PKNOX1P55347 436 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 CLDN15P56746 228 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 CLDN18P56856 261 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 KRTAP1-1Q07627 177 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 CSTF3Q12996 717 aaKnown RBP10.47□□□□□ -0.73
TUBB3-204ENST00000554116 LCP2Q13094 533 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 CAPRIN1Q14444 709 aaKnown RBP10.47□□□□□ -0.73
TUBB3-204ENST00000554116 NNATQ16517 81 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 P3H2Q8IVL5 708 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 TRIM42Q8IWZ5 723 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 C4orf33Q8N1A6 199 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 C1orf52Q8N6N3 182 aaKnown RBP10.47□□□□□ -0.73
TUBB3-204ENST00000554116 GBP7Q8N8V2 638 aaPredicted RBP10.47□□□□□ -0.73
TUBB3-204ENST00000554116 OR1J4Q8NGS1 313 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 RNF138Q8WVD3 245 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 WNT2BQ93097 391 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 TM4SF18Q96CE8 201 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 STARD4Q96DR4 205 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 Q96MF0 132 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 HS3ST6Q96QI5 342 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 PIP5K1AQ99755 562 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 SFXN3Q9BWM7 321 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 C12orf65Q9H3J6 166 aaKnown RBP10.47□□□□□ -0.73
TUBB3-204ENST00000554116 MID1IP1Q9NPA3 183 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 EXO1Q9UQ84 846 aaKnown RBP10.47□□□□□ -0.73
TUBB3-204ENST00000554116 TIMM22Q9Y584 194 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 PCDHA9Q9Y5H5 950 aa10.47□□□□□ -0.73
TUBB3-204ENST00000554116 ABCA1O95477 2261 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 C1orf226A1L170 272 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 CCDC151A5D8V7 595 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 CAPN14A8MX76 684 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 INAFM1C9JVW0 142 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 PLOD2O00469 737 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 UBFD1O14562 309 aaKnown RBP10.46□□□□□ -0.73
TUBB3-204ENST00000554116 HCRTR2O43614 444 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 ZIC3O60481 467 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 NME6O75414 186 aaPredicted RBP10.46□□□□□ -0.73
TUBB3-204ENST00000554116 ERN1O75460 977 aaKnown RBP10.46□□□□□ -0.73
TUBB3-204ENST00000554116 CBX7O95931 251 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 ENO1P06733 434 aaKnown RBP10.46□□□□□ -0.73
TUBB3-204ENST00000554116 CYP4B1P13584 511 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 CPA3P15088 417 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 CHN1P15882 459 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 NAGAP17050 411 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 DEKP35659 375 aaKnown RBP10.46□□□□□ -0.73
TUBB3-204ENST00000554116 HTR6P50406 440 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 B3GALT5-AS1P59052 145 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 DNAJB13P59910 316 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 SRYQ05066 204 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 SLC18A2Q05940 514 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 IFFO1Q0D2I5 559 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 EXOSC7Q15024 291 aaKnown RBP10.46□□□□□ -0.73
TUBB3-204ENST00000554116 TOMM20Q15388 145 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 SF3B4Q15427 424 aaKnown RBP eCLIP10.46□□□□□ -0.73
TUBB3-204ENST00000554116 PRICKLE4Q2TBC4 344 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 CFAP157Q5JU67 520 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 WDR93Q6P2C0 686 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 ZNF474Q6S9Z5 364 aaPredicted RBP10.46□□□□□ -0.73
TUBB3-204ENST00000554116 SCIMPQ6UWF3 145 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 GALNT12Q8IXK2 581 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 RDH11Q8TC12 318 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 KCNA7Q96RP8 456 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 BDH2Q9BUT1 245 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 ITPAQ9BY32 194 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 MAT2BQ9NZL9 334 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 EHD3Q9NZN3 535 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 HEY2Q9UBP5 337 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.46□□□□□ -0.73
TUBB3-204ENST00000554116 FBXL2Q9UKC9 423 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 PSME2Q9UL46 239 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 MAPRE3Q9UPY8 281 aa10.46□□□□□ -0.73
TUBB3-204ENST00000554116 V9GYY5 206 aaPredicted RBP10.46□□□□□ -0.73
TUBB3-204ENST00000554116 A0A1W2PNV4 684 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 ERAL1O75616 437 aaKnown RBP10.45□□□□□ -0.74
TUBB3-204ENST00000554116 NUDT17P0C025 328 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 CPMP14384 443 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 PORP16435 677 aaPredicted RBP10.45□□□□□ -0.74
TUBB3-204ENST00000554116 NT5EP21589 574 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 MC3RP41968 323 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 EMDP50402 254 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 GAS1P54826 345 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 FOXA1P55317 472 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 NAA20P61599 178 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 TRA2BP62995 288 aaKnown RBP10.45□□□□□ -0.74
TUBB3-204ENST00000554116 HMGCS1Q01581 520 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 BTKQ06187 659 aa10.45□□□□□ -0.74
TUBB3-204ENST00000554116 MAP4K2Q12851 820 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms