RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 MT-ND2P03891 347 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 THBS1P07996 1170 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 TDGF1P13385 188 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 RPS4Y1P22090 263 aaKnown RBP8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 CD1CP29017 333 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 GABRA3P34903 492 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 GCGRP47871 477 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 AVPR1BP47901 424 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 SNRPGP62308 76 aaKnown RBP8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 SKP1P63208 163 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 EEF1A1P68104 462 aaKnown RBP8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 EFNB1P98172 346 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 SQSTM1Q13501 440 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 COL9A2Q14055 689 aaPredicted RBP8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 EXOSC7Q15024 291 aaKnown RBP8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 TRAM2Q15035 370 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 MAPK14Q16539 360 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 DECR1Q16698 335 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 SYT6Q5T7P8 510 aaPredicted RBP8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 GPR107Q5VW38 600 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 C12orf73Q69YU5 71 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 PRSS48Q7RTY5 328 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 KANSL1Q7Z3B3 1105 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 HMGN2P46Q86SG4 172 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 WDR5BQ86VZ2 330 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 CCDC103Q8IW40 242 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 PEX5LQ8IYB4 626 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 NLGN4XQ8N0W4 816 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 ZNF619Q8N2I2 560 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 DEFB123Q8N688 67 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 GNPDA2Q8TDQ7 276 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 TRUB1Q8WWH5 349 aaKnown RBP8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 DIO2Q92813 273 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 C12orf43Q96C57 262 aaKnown RBP8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 ISOC1Q96CN7 298 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 MPP4Q96JB8 637 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 GPA33Q99795 319 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 ALOXE3Q9BYJ1 711 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 ZNF350Q9GZX5 532 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 CCNB1IP1Q9NPC3 277 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 ADAP2Q9NPF8 381 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 POLE3Q9NRF9 147 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 RASSF1Q9NS23 344 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 SEMA4GQ9NTN9 838 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 FBXO34Q9NWN3 711 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 KLHL28Q9NXS3 571 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 KCNE5Q9UJ90 142 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 SLC6A14Q9UN76 642 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 CDC14AQ9UNH5 594 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 SATB2Q9UPW6 733 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 CLCA2Q9UQC9 943 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 ZNF443Q9Y2A4 671 aaPredicted RBP8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 WDR45Q9Y484 360 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 TRIOBPQ9H2D6 2365 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 ABCA7Q8IZY2 2146 aa8.74□□□□□ -1.01
MTHFD1-203ENST00000553391 CDH23Q9H251 3354 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 C5orf42Q9H799 3197 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 GXYLT2A0PJZ3 443 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 SH3D21A4FU49 640 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 CLCA1A8K7I4 914 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 CLDN4O14493 209 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 HRO43593 1189 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 HYAL3O43820 417 aaPredicted RBP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 STX11O75558 287 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 INMTO95050 263 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 OR5F1O95221 314 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 ATE1O95260 518 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 LYPD3O95274 346 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 THY1P04216 161 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 DBIP07108 87 aaKnown RBP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 IGFBP1P08833 259 aaPredicted RBP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 GLB1P16278 677 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 MMP11P24347 488 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 ALDH4A1P30038 563 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 CNR2P34972 360 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 TRHRP34981 398 aaPredicted RBP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 MAP2K4P45985 399 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 STT3AP46977 705 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 GIPRP48546 466 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 MASP1P48740 699 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 EMDP50402 254 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 ZNF136P52737 540 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 GP2P55259 537 aaKnown RBP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 SH3BGRP55822 239 aaPredicted RBP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 HSD17B7P56937 341 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 POU6F2P78424 691 aaPredicted RBP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 BTG2P78543 158 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 LSM11P83369 360 aaKnown RBP eCLIP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 ZXDAP98168 799 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 MAT1AQ00266 395 aaKnown RBP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 CDK5Q00535 292 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 FUT7Q11130 342 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 ST3GAL3Q11203 375 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 FOXD4Q12950 439 aaPredicted RBP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 ERV3-1Q14264 604 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 GRM7Q14831 915 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 LARS2Q15031 903 aaKnown RBP8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 FGD3Q5JSP0 725 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 SLC25A30Q5SVS4 291 aa8.73□□□□□ -1.01
MTHFD1-203ENST00000553391 DCST2Q5T1A1 773 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms