RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 CCNJQ5T5M9 372 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 BCORP1Q8N888 145 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 EXD3Q8N9H8 876 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 OR5M3Q8NGP4 307 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 XAGE5Q8WWM1 108 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 ROPN1LQ96C74 230 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 SPACA9Q96E40 222 aaPredicted RBP19.53■□□□□ 0.72
VPS29-206ENST00000549578 THUMPD3Q9BV44 507 aaKnown RBP19.53■□□□□ 0.72
VPS29-206ENST00000549578 HPF1Q9NWY4 346 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 GIN1Q9NXP7 522 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 ZNF451Q9Y4E5 1061 aa19.53■□□□□ 0.72
VPS29-206ENST00000549578 OR5H15A6NDH6 313 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 DUXAA6NLW8 204 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 CCT8L1PA6NM43 557 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 REM1O75628 298 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 IGKV1D-16P01601 117 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 ESRRAP11474 423 aaPredicted RBP19.52■□□□□ 0.72
VPS29-206ENST00000549578 PIGAP37287 484 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 CASRP41180 1078 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 CYB561P49447 251 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 FBXW4P57775 412 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 POU6F2P78424 691 aaPredicted RBP19.52■□□□□ 0.72
VPS29-206ENST00000549578 ZNF791Q3KP31 576 aaPredicted RBP19.52■□□□□ 0.72
VPS29-206ENST00000549578 RABL3Q5HYI8 236 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 DESI1Q6ICB0 168 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 NANOGP8Q6NSW7 305 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 FIGNL1Q6PIW4 674 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 FBXO27Q8NI29 283 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 C9orf43Q8TAL5 461 aaPredicted RBP19.52■□□□□ 0.72
VPS29-206ENST00000549578 EFHD2Q96C19 240 aaPredicted RBP19.52■□□□□ 0.72
VPS29-206ENST00000549578 NSL1Q96IY1 281 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 SIGLEC12Q96PQ1 595 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 BTBD2Q9BX70 525 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 RNF32Q9H0A6 362 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 ADNPQ9H2P0 1102 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 NANOGQ9H9S0 305 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 ZNF71Q9NQZ8 489 aaPredicted RBP19.52■□□□□ 0.72
VPS29-206ENST00000549578 TUBD1Q9UJT1 453 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 GMEB1Q9Y692 573 aa19.52■□□□□ 0.72
VPS29-206ENST00000549578 EVPLLA8MZ36 301 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 ASNA1O43681 348 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 PPM1BO75688 479 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 UBOX5O94941 541 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 KCNK2O95069 426 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 NUDT7P0C024 238 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 KRT20P35900 424 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 ANXA11P50995 505 aaKnown RBP19.51■□□□□ 0.71
VPS29-206ENST00000549578 DECR1Q16698 335 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 ZNF227Q86WZ6 799 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 CYP4Z2PQ8N1L4 340 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 FAM13CQ8NE31 585 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 CATSPER1Q8NEC5 780 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 TM9SF4Q92544 642 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 HAS2Q92819 552 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 ADOQ96SZ5 270 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 RAD21L1Q9H4I0 556 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 FBXO34Q9NWN3 711 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 LRFN1Q9P244 771 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 PCDHGB7Q9Y5F8 929 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 EXPH5Q8NEV8 1989 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 ERVH48-1M5A8F1 160 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 TSPAN2O60636 221 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 UGT2B11O75310 529 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 T-ENOLP0DO92 83 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 GPX2P18283 190 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 SLC6A2P23975 617 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 IL12BP29460 328 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 TMED10P49755 219 aaKnown RBP19.51■□□□□ 0.71
VPS29-206ENST00000549578 DSTNP60981 165 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 PSPHP78330 225 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 FUT5Q11128 374 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 FADDQ13158 208 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 OR1C1Q15619 314 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 DCST2Q5T1A1 773 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 SPINK14Q6IE38 97 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 IGFL3Q6UXB1 125 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 HACD2Q6Y1H2 254 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 ASB18Q6ZVZ8 466 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 OLIG3Q7RTU3 272 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 C16orf62Q7Z3J2 963 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 OR10G3Q8NGC4 313 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 GPATCH1Q9BRR8 931 aaKnown RBP19.51■□□□□ 0.71
VPS29-206ENST00000549578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.51■□□□□ 0.71
VPS29-206ENST00000549578 EXD2Q9NVH0 621 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 CORO2BQ9UQ03 480 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 PCDHGB3Q9Y5G1 929 aa19.51■□□□□ 0.71
VPS29-206ENST00000549578 PRAMEF27A3QJZ7 478 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 NEURL1O76050 574 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 SOX30O94993 753 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 AGR2O95994 175 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 NAGAP17050 411 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 MAGEA8P43361 318 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 TXNL4AP83876 142 aaKnown RBP19.5■□□□□ 0.71
VPS29-206ENST00000549578 NTRK2Q16620 822 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 LACTB2Q53H82 288 aaPredicted RBP19.5■□□□□ 0.71
VPS29-206ENST00000549578 ATAD3BQ5T9A4 648 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 HEPHL1Q6MZM0 1159 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 C8orf82Q6P1X6 216 aaPredicted RBP19.5■□□□□ 0.71
VPS29-206ENST00000549578 PCSK4Q6UW60 755 aa19.5■□□□□ 0.71
VPS29-206ENST00000549578 MDGA2Q7Z553 956 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms