RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CDK9P50750 372 aaKnown RBP14.53□□□□□ -0.08
DDX54-204ENST00000546898 RPL14P50914 215 aaKnown RBP14.53□□□□□ -0.08
DDX54-204ENST00000546898 EMX2Q04743 252 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 PTGR1Q14914 329 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 PDCD2Q16342 344 aaPredicted RBP14.53□□□□□ -0.08
DDX54-204ENST00000546898 GXYLT1Q4G148 440 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 WLSQ5T9L3 541 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 IL23RQ5VWK5 629 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 DESI1Q6ICB0 168 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 ANGPTL8Q6UXH0 198 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 C3P1Q6ZMU1 363 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 LARP4Q71RC2 724 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■□□□□ 11.1
DDX54-204ENST00000546898 LRRC34Q8IZ02 419 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 ANKRD42Q8N9B4 389 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 CEP70Q8NHQ1 597 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 RNF138Q8WVD3 245 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 ZBTB9Q96C00 473 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 TLCD1Q96CP7 247 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 PAIP2Q9BPZ3 127 aaKnown RBP14.53□□□□□ -0.08
DDX54-204ENST00000546898 C20orf27Q9GZN8 174 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 SLC6A15Q9H2J7 730 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 ZNF395Q9H8N7 513 aaPredicted RBP14.53□□□□□ -0.08
DDX54-204ENST00000546898 TMBIM4Q9HC24 238 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 PNPLA3Q9NST1 481 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 COQ3Q9NZJ6 369 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 NOP53Q9NZM5 478 aaKnown RBP14.53□□□□□ -0.08
DDX54-204ENST00000546898 NTMQ9P121 344 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 MRTO4Q9UKD2 239 aaKnown RBP14.53□□□□□ -0.08
DDX54-204ENST00000546898 MAPRE3Q9UPY8 281 aa14.53□□□□□ -0.08
DDX54-204ENST00000546898 NUP214P35658 2090 aaPredicted RBP14.53□□□□□ -0.08
DDX54-204ENST00000546898 GNB5O14775 395 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 CLDN14O95500 239 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 HOXD4P09016 255 aaPredicted RBP14.52□□□□□ -0.09
DDX54-204ENST00000546898 PRPS1L1P21108 318 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 ACVR2AP27037 513 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 PSMD4P55036 377 aaKnown RBP14.52□□□□□ -0.09
DDX54-204ENST00000546898 WDR4P57081 412 aaKnown RBP14.52□□□□□ -0.09
DDX54-204ENST00000546898 C21orf58P58505 322 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 MAGOHP61326 146 aaKnown RBP14.52□□□□□ -0.09
DDX54-204ENST00000546898 BST1Q10588 318 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 CASP8Q14790 479 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 DECR1Q16698 335 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 VPS26BQ4G0F5 336 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 HIST2H2BCQ6DN03 193 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 NCCRP1Q6ZVX7 275 aaPredicted RBP14.52□□□□□ -0.09
DDX54-204ENST00000546898 ACAD11Q709F0 780 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 OR4N2Q8NGD1 307 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 RAB3IL1Q8TBN0 382 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 HOXB13Q92826 284 aaPredicted RBP14.52□□□□□ -0.09
DDX54-204ENST00000546898 EFHD2Q96C19 240 aaPredicted RBP14.52□□□□□ -0.09
DDX54-204ENST00000546898 MS4A4EQ96PG1 132 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 PRPF18Q99633 342 aaKnown RBP14.52□□□□□ -0.09
DDX54-204ENST00000546898 GALNT9Q9HCQ5 603 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 SPRR3Q9UBC9 169 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 ACAD8Q9UKU7 415 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 CBLCQ9ULV8 474 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 HRH3Q9Y5N1 445 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 WIF1Q9Y5W5 379 aa14.52□□□□□ -0.09
DDX54-204ENST00000546898 EMC8O43402 210 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 TRAPPC6AO75865 159 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 GABRA1P14867 456 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 COL8A1P27658 744 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 DCTP40126 519 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 PRR5P85299 388 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 CPTPQ5TA50 214 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 ZNF585AQ6P3V2 769 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 ZCCHC12Q6PEW1 402 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 TRIM42Q8IWZ5 723 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 RIMKLAQ8IXN7 391 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 CDRT4Q8N9R6 151 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 NUP43Q8NFH3 380 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 OR7A2PQ8NGA2 310 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 OR5M9Q8NGP3 310 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 ASB5Q8WWX0 329 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 GNRHR2Q96P88 292 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 BHLHE41Q9C0J9 482 aaPredicted RBP14.51□□□□□ -0.09
DDX54-204ENST00000546898 CHST11Q9NPF2 352 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 NKIRAS1Q9NYS0 192 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 ABCG2Q9UNQ0 655 aa14.51□□□□□ -0.09
DDX54-204ENST00000546898 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 C15orf38-AP3S2A0A0A6YYH1 394 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 A0A1W2PRB8 838 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 CBR3O75828 277 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 NKX2-2O95096 273 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 KCNH1O95259 989 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 IL33O95760 270 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 LAMP1P11279 417 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 G6PDP11413 515 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 CYP4B1P13584 511 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 PTGER4P35408 488 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 GCKP35557 465 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 MAP3K8P41279 467 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 TRPC1P48995 793 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 CLDN8P56748 225 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 GAB1Q13480 694 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 ZNF630Q2M218 657 aaPredicted RBP14.5□□□□□ -0.09
DDX54-204ENST00000546898 NHSL2Q5HYW2 709 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 AGBL2Q5U5Z8 902 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 ATG16L1Q676U5 607 aa14.5□□□□□ -0.09
DDX54-204ENST00000546898 B3GNT6Q6ZMB0 384 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms