RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TCAF2A6NFQ2 919 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 NEMP2A6NFY4 417 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 HMSDA8MTL9 139 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SEC14L6B5MCN3 397 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TMEM238C9JI98 176 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 M0R143 59 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CLIC1O00299 241 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PDXKO00764 312 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SCDO00767 359 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 GABRDO14764 452 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MRASO14807 208 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MDM4O15151 490 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PMM2O15305 246 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 LYRM1O43325 122 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 GRID2O43424 1007 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 KCNAB3O43448 404 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TGOLN2O43493 480 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PRKAB2O43741 272 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ZNF821O75541 412 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 RP2O75695 350 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 HPP00738 406 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MT-ND1P03886 318 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 RPLP2P05387 115 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 IGKV5-2P06315 115 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MMP3P08254 477 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 DBHP09172 617 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CTXN2P0C2S0 81 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 HKR1P10072 659 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 RAP2AP10114 183 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 GAAP10253 952 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 KITP10721 976 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 IL1RNP18510 177 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 RCC1P18754 421 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ACO1P21399 889 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 BCKDHBP21953 392 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CCNOP22674 350 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CD40P25942 277 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ITGB7P26010 798 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ELK4P28324 431 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 HSD11B1P28845 292 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 BDKRB2P30411 391 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SFNP31947 248 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MSX2P35548 267 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SLC1A2P43004 574 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MAGEA3P43357 314 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 KIR2DL3P43628 341 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CDX1P47902 265 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 RPL14P50914 215 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PRKAG1P54619 331 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ARPP19P56211 112 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CDC42P60953 191 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 RBX1P62877 108 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SMAD3P84022 425 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TNFRSF17Q02223 184 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SP3Q02447 781 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 LIPEQ05469 1076 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CD47Q08722 323 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 FABP9Q0Z7S8 132 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TWF1Q12792 350 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ELAVL2Q12926 359 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TUSC3Q13454 348 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SEMA5AQ13591 1074 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 BOP1Q14137 746 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 FASTKQ14296 549 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 KIR3DS1Q14943 382 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PGM5Q15124 567 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 LRRC41Q15345 812 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PNLIPRP3Q17RR3 467 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 GOLGA7BQ2TAP0 167 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 NDUFAF6Q330K2 333 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MOGAT2Q3SYC2 334 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 LGALSLQ3ZCW2 172 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CBWD6Q4V339 395 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SYTL3Q4VX76 610 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 C14orf28Q4W4Y0 310 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 KLHL22Q53GT1 634 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SOWAHCQ53LP3 525 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SGO1Q5FBB7 561 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 EOGTQ5NDL2 527 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 C10orf120Q5SQS8 335 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CERCAMQ5T4B2 595 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 BSPRYQ5W0U4 402 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TRIQKQ629K1 86 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SAXO2Q658L1 398 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 GLYATQ6IB77 296 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TANGO2Q6ICL3 276 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ACSM5Q6NUN0 579 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SLC30A6Q6NXT4 461 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 LPCAT3Q6P1A2 487 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TMEM71Q6P5X7 295 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PAQR3Q6TCH7 311 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PRSS55Q6UWB4 352 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 LRRN1Q6UXK5 716 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CYHR1Q6ZMK1 362 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MBOAT1Q6ZNC8 495 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CHMP1BQ7LBR1 199 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ZNF367Q7RTV3 350 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 RBM23Q86U06 439 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TSPAN33Q86UF1 283 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MYPOPQ86VE0 399 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms