RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 CTRB2Q6GPI1 263 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 PGBD2Q6P3X8 592 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 TNFAIP8L2Q6P589 184 aaPredicted RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 CASP12Q6UXS9 341 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 TMEM92Q6UXU6 159 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 LAPTM4BQ86VI4 370 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 ZNF655Q8N720 491 aaPredicted RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 RASGEF1AQ8N9B8 481 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 OR52N2Q8NGI0 321 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 HSD17B8Q92506 261 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 ELSPBP1Q96BH3 223 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 RNF32Q9H0A6 362 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 TBC1D17Q9HA65 648 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 THAP10Q9P2Z0 257 aaPredicted RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 ZNF282Q9UDV7 671 aaPredicted RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 RPL36Q9Y3U8 105 aaKnown RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 PLEKHM1Q9Y4G2 1056 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 GSAPA4D1B5 854 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 CD8B2A6NJW9 211 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 PDPK1O15530 556 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 IFNW1P05000 195 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 HIST1H2AGP0C0S8 130 aaPredicted RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 CD8BP10966 210 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 GLULP15104 373 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 RHCEP18577 417 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 HIST1H2ADP20671 130 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 PTX3P26022 381 aaPredicted RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 VIPR1P32241 457 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 CHI3L1P36222 383 aaPredicted RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 GSTM5P46439 218 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 BDKRB1P46663 353 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 EVX1P49640 407 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 CLCNKAP51800 687 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 TAGLNQ01995 201 aaKnown RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 CSTF1Q05048 431 aaKnown RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 ELAVL3Q14576 367 aaKnown RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 TCTN3Q6NUS6 607 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 MZT2BQ6NZ67 158 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 RTL10Q7L3V2 364 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 KCTD20Q7Z5Y7 419 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 WDR48Q8TAF3 677 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 DNAJA4Q8WW22 397 aaPredicted RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 APOBEC4Q8WW27 367 aaKnown RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 UCN3Q969E3 161 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 KIAA1143Q96AT1 154 aaPredicted RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 HIST1H2AHQ96KK5 128 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 HYLS1Q96M11 299 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 HIST1H2AJQ99878 128 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 H2AFJQ9BTM1 129 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 SORBS1Q9BX66 1292 aaKnown RBP8.59□□□□□ -1.03
THBS3-211ENST00000541990 PLA2G12AQ9BZM1 189 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 RETREG1Q9H6L5 497 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 KCND3Q9UK17 655 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 RABL2BQ9UNT1 228 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 SH2B3Q9UQQ2 575 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 AUP1Q9Y679 476 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 SLCO1B1Q9Y6L6 691 aa8.59□□□□□ -1.03
THBS3-211ENST00000541990 TRBV23OR9-2A0A075B6M9 112 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 A8MVJ9 347 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 ATP6V1G2-DDX39BF2Z307 99 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 TRIM3O75382 744 aaPredicted RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 HRGP04196 525 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 BCHEP06276 602 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 ELK1P19419 428 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 BMP8BP34820 402 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 BTCP35070 178 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 RPA4Q13156 261 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 ILKQ13418 452 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 PIN1Q13526 163 aaPredicted RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 NAE1Q13564 534 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 EXOSC2Q13868 293 aaKnown RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 AANATQ16613 207 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 PLK5Q496M5 336 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 METTL2BQ6P1Q9 378 aaKnown RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 TMEM220Q6QAJ8 160 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 CDH24Q86UP0 819 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 LHFPL3Q86UP9 236 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 THOC6Q86W42 341 aaKnown RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 TRAPPC5Q8IUR0 188 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 TMEM163Q8TC26 289 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 SLC7A13Q8TCU3 470 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 HMGB4Q8WW32 186 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 RAB8BQ92930 207 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 ZNF582Q96NG8 517 aaPredicted RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 HDHD2Q9H0R4 259 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 POLR2J3Q9H1A7 115 aaKnown RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 SPNS1Q9H2V7 528 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 UBE2ZQ9H832 354 aaPredicted RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 TRPV4Q9HBA0 871 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 TESQ9UGI8 421 aaKnown RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 PLAGL1Q9UM63 463 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 LOC105369274A0A096LPK9 316 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 EDDM13A0A1B0GTR0 161 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 TEX51A0A1B0GUA7 166 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 SHISA7A6NL88 538 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 RNASET2O00584 256 aaKnown RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 SGTAO43765 313 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 TSPAN9O75954 239 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 KLHL18O94889 574 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 RAB36O95755 333 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms