RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 CYP7B1O75881 506 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 GASTP01350 101 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 MSL3P1P0C860 447 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 ALPPL2P10696 532 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 GLB1P16278 677 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 CHMP24386 653 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 FMO3P31513 532 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 SLC5A2P31639 672 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 SNRPGP62308 76 aaKnown RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 POU6F2P78424 691 aaPredicted RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 IGLV3-21P80748 117 aaPredicted RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPARC-209ENST00000539687 TARDBPQ13148 414 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPARC-209ENST00000539687 SLC13A2Q13183 592 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 PTGES3Q15185 160 aaKnown RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 TBCEQ15813 527 aaPredicted RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 DCST2Q5T1A1 773 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 SYT6Q5T7P8 510 aaPredicted RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 GPR107Q5VW38 600 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 SLX4IPQ5VYV7 408 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 GTF2IRD2BQ6EKJ0 949 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 TYW3Q6IPR3 259 aaKnown RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 LAIR2Q6ISS4 152 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 C1orf94Q6P1W5 598 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 PGBD2Q6P3X8 592 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 FRRS1Q6ZNA5 592 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 LINC00299Q6ZSB3 139 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 GTF2IRD2Q86UP8 949 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 ANKRD13BQ86YJ7 626 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 ARHGEF39Q8N4T4 335 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 FRMD1Q8N878 549 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 OR6T1Q8NGN1 323 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 OR8J1Q8NGP2 316 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 C1orf216Q8TAB5 229 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 PIGXQ8TBF5 258 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 ACOT11Q8WXI4 607 aaPredicted RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 CDS1Q92903 461 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 GTPBP3Q969Y2 492 aaKnown RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 C12orf43Q96C57 262 aaKnown RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 RBM18Q96H35 190 aaKnown RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 DGAT2Q96PD7 388 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 MAP3K3Q99759 626 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 COPS4Q9BT78 406 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 LMF2Q9BU23 707 aaKnown RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 DUSP23Q9BVJ7 150 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 FAM60AQ9NP50 221 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 C11orf16Q9NQ32 467 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 PRTFDC1Q9NRG1 225 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 RLIMQ9NVW2 624 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 C2orf42Q9NWW7 574 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 NLGN3Q9NZ94 848 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 MAT2BQ9NZL9 334 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 FTSJ1Q9UET6 329 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 PRODH2Q9UF12 536 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 TESQ9UGI8 421 aaKnown RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 WARS2Q9UGM6 360 aaKnown RBP9.5□□□□□ -0.89
SPARC-209ENST00000539687 PSORS1C1Q9UIG5 152 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 GMEB2Q9UKD1 530 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 MMACHCQ9Y4U1 282 aa9.5□□□□□ -0.89
SPARC-209ENST00000539687 TRIM64BA6NI03 449 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 H3BMQ9 156 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 H3BN98 237 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 K7ESF4 209 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 SGK494L7N484 410 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 SLC22A1O15245 554 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 TOX3O15405 576 aaPredicted RBP9.49□□□□□ -0.89
SPARC-209ENST00000539687 B4GAT1O43505 415 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 KIAA0513O60268 411 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 WBP4O75554 376 aaKnown RBP9.49□□□□□ -0.89
SPARC-209ENST00000539687 NKX2-2O95096 273 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 CDK1P06493 297 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 ACP2P11117 423 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 NID1P14543 1247 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 PNLIPP16233 465 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 PCMT1P22061 227 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 RPS4Y1P22090 263 aaKnown RBP9.49□□□□□ -0.89
SPARC-209ENST00000539687 CALRP27797 417 aaKnown RBP9.49□□□□□ -0.89
SPARC-209ENST00000539687 STT3AP46977 705 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 SMSP52788 366 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 PDX1P52945 283 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 PSPHP78330 225 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 HSD11B2P80365 405 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 EMX1Q04741 257 aaPredicted RBP9.49□□□□□ -0.89
SPARC-209ENST00000539687 ZNF155Q12901 538 aaPredicted RBP9.49□□□□□ -0.89
SPARC-209ENST00000539687 PIN1Q13526 163 aaPredicted RBP9.49□□□□□ -0.89
SPARC-209ENST00000539687 DUSP5Q16690 384 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 DECR1Q16698 335 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 CYP27C1Q4G0S4 372 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 ENTPD8Q5MY95 495 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 TMEM201Q5SNT2 666 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 SLC25A30Q5SVS4 291 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 UBE2UQ5VVX9 321 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 C12orf73Q69YU5 71 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 RPL13AP3Q6NVV1 102 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 PODNL1Q6PEZ8 512 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 PTCHD4Q6ZW05 846 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 PLEKHM3Q6ZWE6 761 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 ZNF761Q86XN6 746 aaPredicted RBP9.49□□□□□ -0.89
SPARC-209ENST00000539687 CMIPQ8IY22 773 aa9.49□□□□□ -0.89
SPARC-209ENST00000539687 RNF113BQ8IZP6 322 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms