RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 BBS4Q96RK4 519 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 UBL7Q96S82 380 aaPredicted RBP9.07□□□□□ -0.96
CDH13-204ENST00000539548 NRTNQ99748 197 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 MENTQ9BUN1 341 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 MYO10Q9HD67 2058 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 TNRC18O15417 2968 aaPredicted RBP9.07□□□□□ -0.96
CDH13-204ENST00000539548 A0A1W2PPV9 198 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 INMT-MINDY4F8WBC2 141 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 SURF4O15260 269 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 AKR7A2O43488 359 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 LCMT2O60294 686 aaKnown RBP9.07□□□□□ -0.96
CDH13-204ENST00000539548 EFCAB14O75071 495 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 CLEC3AO75596 197 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 CXCL14O95715 111 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 FGF19O95750 216 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 ARSBP15848 533 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 NTSP30990 170 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 PPM1AP35813 382 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 INPP1P49441 399 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 RNF144AP50876 292 aaPredicted RBP9.07□□□□□ -0.96
CDH13-204ENST00000539548 PRKAG1P54619 331 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 CTBP2P56545 445 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 ST8SIA6P61647 398 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 ST3GAL3Q11203 375 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 ADAM15Q13444 863 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 BTBD16Q32M84 506 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 ARHGAP15Q53QZ3 475 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 ZNF311Q5JNZ3 666 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 TMEM91Q6ZNR0 172 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 RRM2BQ7LG56 351 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 HMGN2P46Q86SG4 172 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 TMIEQ8NEW7 156 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 OR4Q3Q8NH05 313 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 MOAP1Q96BY2 351 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 FAM46AQ96IP4 442 aaKnown RBP9.07□□□□□ -0.96
CDH13-204ENST00000539548 YIPF4Q9BSR8 244 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 PRR14Q9BWN1 585 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 FAIM2Q9BWQ8 316 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 TEX12Q9BXU0 123 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 PAK6Q9NQU5 681 aaPredicted RBP9.07□□□□□ -0.96
CDH13-204ENST00000539548 SEMA4GQ9NTN9 838 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 IL20Q9NYY1 176 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 CNIH4Q9P003 139 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 PRKAG2Q9UGJ0 569 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 PRKAB1Q9Y478 270 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 PCYT1BQ9Y5K3 369 aaPredicted RBP9.07□□□□□ -0.96
CDH13-204ENST00000539548 WNT6Q9Y6F9 365 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 HEATR5BQ9P2D3 2071 aa9.07□□□□□ -0.96
CDH13-204ENST00000539548 LOC102723532A0A0G2JNH3 316 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 A0A0X1KG70 313 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 WASHC1A8K0Z3 465 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 AGRPO00253 132 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 HMGN2P05204 90 aaKnown RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 ADH1AP07327 375 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 GNSP15586 552 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 ELK1P19419 428 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 FPR3P25089 353 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 PSMB5P28074 263 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 HTR1FP30939 366 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 TRIM23P36406 574 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 SSR2P43308 183 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 ARFIP1P53367 373 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 CSNK1G2P78368 415 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 BDH1Q02338 343 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 DECR1Q16698 335 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 TMEM52BQ4KMG9 183 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 TMEM35AQ53FP2 167 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 EOGTQ5NDL2 527 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 CLEC12AQ5QGZ9 265 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 VASNQ6EMK4 673 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 LYPD8Q6UX82 237 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 WASH2PQ6VEQ5 465 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 SLAIN1Q8ND83 568 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 OR56A1Q8NGH5 318 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 WFIKKN2Q8TEU8 576 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 SPRYD4Q8WW59 207 aaPredicted RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 AKAP1Q92667 903 aaKnown RBP eCLIP9.06□□□□□ -0.96
CDH13-204ENST00000539548 OTUB1Q96FW1 271 aaPredicted RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 MED30Q96HR3 178 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 COX14Q96I36 57 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 DIABLOQ9NR28 239 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 MCUBQ9NWR8 336 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 SLC23A2Q9UGH3 650 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 CBLCQ9ULV8 474 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 A0A0G2JN53 185 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 C2orf92A0A1B0GVN3 265 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 LRIT2A6NDA9 550 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 CD8B2A6NJW9 211 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 ISM1B1AKI9 464 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 J3QRE1 110 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 PLOD3O60568 738 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 FGF18O76093 207 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 HMGN1P05114 100 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 CD8BP10966 210 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 HK1P19367 917 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 IFNA8P32881 189 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 OR3A3P47888 321 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 MTNR1BP49286 362 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 DEFB103AP81534 67 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 MRPL28Q13084 256 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms