RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 IPPKQ9H8X2 491 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 WDR41Q9HAD4 459 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 ZBTB26Q9HCK0 441 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 MAT2BQ9NZL9 334 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 TXNDC16Q9P2K2 825 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 RNF14Q9UBS8 474 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 NDRG3Q9UGV2 375 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 CFL2Q9Y281 166 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 GPR55Q9Y2T6 319 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-204ENST00000537068 SNX24Q9Y343 169 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 RNF11Q9Y3C5 154 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 TESMINQ9Y4I5 508 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 PCDHA9Q9Y5H5 950 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 TNPO3Q9Y5L0 923 aaKnown RBP4.75□□□□□ -1.65
SNHG1-204ENST00000537068 CR1P17927 2039 aa4.75□□□□□ -1.65
SNHG1-204ENST00000537068 ARID1AO14497 2285 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 A0A087X1B8 175 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 A0A1W2PNV4 684 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 FRG2CA6NGY1 282 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 OR6C70A6NIJ9 312 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 SLC22A31A6NKX4 558 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 KIAA1324LA8MWY0 1029 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 SUPT3HB4E1H0 165 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 EEF1E1-BLOC1S5C9J1V9 151 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 PLOD2O00469 737 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 EEF1E1O43324 174 aaKnown RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 TSPAN2O60636 221 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 ERN1O75460 977 aaKnown RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 SUPT3HO75486 399 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 SOX30O94993 753 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 KLHL2O95198 593 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CLDN9O95484 217 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 TGM6O95932 706 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 C2P06681 752 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 KLK1P06870 262 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CTAGE8P0CG41 777 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CT45A8P0DMV1 189 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CT45A9P0DMV2 189 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CRYGSP22914 178 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CD79BP40259 229 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 KIR2DL2P43627 348 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 STARP49675 285 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 PNLIPRP2P54317 469 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 DIO3P55073 304 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CLDN15P56746 228 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 B3GALT5-AS1P59052 145 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 TRA2BP62995 288 aaKnown RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 RAC1P63000 192 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 PHEXP78562 749 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 IRF9Q00978 393 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 HMGCS1Q01581 520 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 OCRLQ01968 901 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 FAM27E3Q08E93 113 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 GALNT1Q10472 559 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 TRAF3Q13114 568 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 NAB1Q13506 487 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 DDX39BQ13838 428 aaKnown RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CAPRIN1Q14444 709 aaKnown RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 ACKR1Q16570 336 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 PFKFB4Q16877 469 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 FAM83EQ2M2I3 478 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 TRMT12Q53H54 448 aaKnown RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CT45A2Q5DJT8 189 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 EXOSC6Q5RKV6 272 aaKnown RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 ZBTB37Q5TC79 503 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 FRG2Q64ET8 278 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 ZNF474Q6S9Z5 364 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 SHISA2Q6UWI4 295 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 PLXDC2Q6UX71 529 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 ANGPTL8Q6UXH0 198 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 LINC00114Q6XXX2 140 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 C22orf34Q6ZV56 151 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 RAPH1Q70E73 1250 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 LUZP2Q86TE4 346 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 TBC1D1Q86TI0 1168 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 IFNEQ86WN2 208 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 PLCZ1Q86YW0 608 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CTAGE4Q8IX94 777 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 PRR22Q8IZ63 422 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 TMEM151AQ8N4L1 468 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 OR52B6Q8NGF0 335 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 SPATA3Q8NHX4 192 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 ZNF675Q8TD23 568 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 KCTD4Q8WVF5 259 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 EXT2Q93063 718 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 INTS12Q96CB8 462 aaKnown RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 ERP27Q96DN0 273 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 OMA1Q96E52 524 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 C11orf24Q96F05 449 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 CNRIP1Q96F85 164 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 FRG2BQ96QU4 278 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 YIPF4Q9BSR8 244 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 BDH2Q9BUT1 245 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 C1QTNF3Q9BXJ4 246 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 MRPL1Q9BYD6 325 aaKnown RBP4.74□□□□□ -1.65
SNHG1-204ENST00000537068 TMPRSS13Q9BYE2 586 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 KCNF1Q9H3M0 494 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 ACTR8Q9H981 624 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 GALNT9Q9HCQ5 603 aa4.74□□□□□ -1.65
SNHG1-204ENST00000537068 SAYSD1Q9NPB0 183 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms