RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 TVP23BQ9NYZ1 205 aa5.5□□□□□ -1.53
CHD4-206ENST00000536999 PTGFRNQ9P2B2 879 aa5.5□□□□□ -1.53
CHD4-206ENST00000536999 COMMD3Q9UBI1 195 aa5.5□□□□□ -1.53
CHD4-206ENST00000536999 FBXO10Q9UK96 956 aa5.5□□□□□ -1.53
CHD4-206ENST00000536999 UTS2RQ9UKP6 389 aa5.5□□□□□ -1.53
CHD4-206ENST00000536999 MGAT4AQ9UM21 535 aa5.5□□□□□ -1.53
CHD4-206ENST00000536999 EXOGQ9Y2C4 368 aaKnown RBP5.5□□□□□ -1.53
CHD4-206ENST00000536999 BACE2Q9Y5Z0 518 aa5.5□□□□□ -1.53
CHD4-206ENST00000536999 CACNG2Q9Y698 323 aa5.5□□□□□ -1.53
CHD4-206ENST00000536999 MYO10Q9HD67 2058 aa5.5□□□□□ -1.53
CHD4-206ENST00000536999 ATG2AQ2TAZ0 1938 aa5.5□□□□□ -1.53
CHD4-206ENST00000536999 SHROOM3Q8TF72 1996 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 SCN10AQ9Y5Y9 1956 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 MIA3Q5JRA6 1907 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 MEIKINA0A087WXM9 373 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 TRAV1-2A0A0B4J238 106 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 UBE2QL1A1L167 161 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 TMEM8BA6NDV4 472 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 ZNF840PA6NDX5 716 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 SLC22A31A6NKX4 558 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 IQCF5A8MTL0 148 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 HMSDA8MTL9 139 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 A8MU76 341 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 ISM1B1AKI9 464 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 KDM4EB2RXH2 506 aaPredicted RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 LRRN3E7EW58 273 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 PRR23D1E9PI22 279 aaPredicted RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 TEX46H3BTG2 121 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 PCDH17O14917 1159 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 GSTZ1O43708 216 aaPredicted RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 CHP2O43745 196 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 DIRAS1O95057 198 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 VNN2O95498 520 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 EGFP01133 1207 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 MT-ND5P03915 603 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 DCNP07585 359 aaKnown RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 PRR23D2P0DMB1 279 aaPredicted RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 DDCP20711 480 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 DNASE1P24855 282 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 TACR1P25103 407 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 ELAVL4P26378 380 aaKnown RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 AGTR1P30556 359 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 CALCRP30988 508 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 CORO1AP31146 461 aaKnown RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 UQCRC1P31930 480 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 CCR7P32248 378 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 CA8P35219 290 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 HNF1BP35680 557 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 THPOP40225 353 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 TSFMP43897 325 aaKnown RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 BDKRB1P46663 353 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 SPINT3P49223 89 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 MAN2A2P49641 1150 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 CDKN1CP49918 316 aaPredicted RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 KHKP50053 298 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 MANFP55145 182 aaKnown RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 PFN3P60673 137 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 RACK1P63244 317 aaKnown RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 HBA1P69905 142 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 ARF5P84085 180 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 PRR5P85299 388 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 TGM3Q08188 693 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 FGL1Q08830 312 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 RPA4Q13156 261 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 SNTB2Q13425 540 aaKnown RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 IHHQ14623 411 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 GINS1Q14691 196 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 PTPRCAPQ14761 206 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 NTRK2Q16620 822 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.49□□□□□ -1.534e-10■■■□□ 18.2
CHD4-206ENST00000536999 SPDYE7PQ495Y7 208 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 TMEM35AQ53FP2 167 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 SYT14P1Q58G82 188 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 ELFN2Q5R3F8 820 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 ATAT1Q5SQI0 421 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 LAIR1Q6GTX8 287 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 FAM71E1Q6IPT2 247 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 FAM198BQ6UWH4 519 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 CD300LGQ6UXG3 332 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 RTL4Q6ZR62 310 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 PLEKHM3Q6ZWE6 761 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 BTN2A1Q7KYR7 527 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 GPAT4Q86UL3 456 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 PDZD3Q86UT5 571 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 DENND1CQ8IV53 801 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 RASGRP3Q8IV61 690 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 TRIM48Q8IWZ4 208 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 TMEM130Q8N3G9 435 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 C9orf62Q8N4C0 152 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 ACBD7Q8N6N7 88 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 Q8N9G6 341 aaPredicted RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 ANKRD53Q8N9V6 530 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 FAM71CQ8NEG0 241 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 OR2AP1Q8NGE2 309 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 HUS1BQ8NHY5 278 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 SNIP1Q8TAD8 396 aaKnown RBP5.49□□□□□ -1.53
CHD4-206ENST00000536999 SUN3Q8TAQ9 357 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.49□□□□□ -1.53
CHD4-206ENST00000536999 PIGXQ8TBF5 258 aa5.49□□□□□ -1.53
CHD4-206ENST00000536999 SFXN5Q8TD22 340 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms