RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 AQP6Q13520 282 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 ZNF846Q147U1 533 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 NR1D2Q14995 579 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 LTB4RQ15722 352 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 PUS10Q3MIT2 529 aaKnown RBP12.69□□□□□ -0.38
SMG6-203ENST00000536871 C6orf132Q5T0Z8 1188 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 MFSD4BQ5TF39 518 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 GARNL3Q5VVW2 1013 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 RASSF6Q6ZTQ3 369 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 USP43Q70EL4 1123 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 SLC46A3Q7Z3Q1 461 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 ZER1Q7Z7L7 766 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 CYP4Z2PQ8N1L4 340 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 SLC16A11Q8NCK7 471 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 KBTBD8Q8NFY9 601 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 TEX47Q8TBZ9 253 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 SNRNP27Q8WVK2 155 aaKnown RBP12.69□□□□□ -0.38
SMG6-203ENST00000536871 SLC9A6Q92581 669 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 DIO2Q92813 273 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 LGALS12Q96DT0 336 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 ZNF578Q96N58 590 aaPredicted RBP12.69□□□□□ -0.38
SMG6-203ENST00000536871 SLC38A2Q96QD8 506 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 ORAI3Q9BRQ5 295 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 LRRC61Q9BV99 259 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 RSPO3Q9BXY4 272 aaPredicted RBP12.69□□□□□ -0.38
SMG6-203ENST00000536871 TCEAL2Q9H3H9 227 aaPredicted RBP12.69□□□□□ -0.38
SMG6-203ENST00000536871 C14orf105Q9NVL8 296 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 EVA1BQ9NVM1 165 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 GPR83Q9NYM4 423 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 NLGN3Q9NZ94 848 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 MKLN1Q9UL63 735 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 CLCA2Q9UQC9 943 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 KCNE3Q9Y6H6 103 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 LRP4O75096 1905 aa12.69□□□□□ -0.38
SMG6-203ENST00000536871 AGAP5A6NIR3 686 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 EFCAB9A8MZ26 197 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 AIREO43918 545 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 LCKP06239 509 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 STSP08842 583 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 ADORA3P0DMS8 318 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 NT5EP21589 574 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 MMP11P24347 488 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 C21orf33P30042 268 aaPredicted RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 CSTF2P33240 577 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMG6-203ENST00000536871 TGFBR2P37173 567 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 LSSP48449 732 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 GIPRP48546 466 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 PCYT1AP49585 367 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 PDX1P52945 283 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 VSX2P58304 361 aaPredicted RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 CDK5Q00535 292 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 FAM53BQ14153 422 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 SMAD2Q15796 467 aaKnown RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 INAQ16352 499 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 LRIT3Q3SXY7 679 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 TYW3Q6IPR3 259 aaKnown RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 ZNF730Q6ZMV8 503 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 PLEKHM3Q6ZWE6 761 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 ADCK1Q86TW2 530 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 ZNF687Q8N1G0 1237 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 CLDN22Q8N7P3 220 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 PATE1Q8WXA2 126 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 OSTF1Q92882 214 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 CDS1Q92903 461 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 ZHX1-C8orf76Q96EF9 292 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 HSPBAP1Q96EW2 488 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 TMEM80Q96HE8 168 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 SDF2Q99470 211 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 MED17Q9NVC6 651 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 DOLKQ9UPQ8 538 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 ERGIC3Q9Y282 383 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 LAMA2P24043 3122 aaKnown RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 CLDN25C9JDP6 229 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 RNH1P13489 461 aaKnown RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 RPS4Y1P22090 263 aaKnown RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 FPR3P25089 353 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 CAPZBP47756 277 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 MAP4K2Q12851 820 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 ZNHIT3Q15649 155 aaPredicted RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 DUSP5Q16690 384 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 PRICKLE4Q2TBC4 344 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 KLHL22Q53GT1 634 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 SLC27A4Q6P1M0 643 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 GDPGP1Q6ZNW5 385 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 MRGPREQ86SM8 312 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 SLCO6A1Q86UG4 719 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 VRK2Q86Y07 508 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 MCATQ8IVS2 390 aaKnown RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 ZNF595Q8IYB9 648 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 RNF113BQ8IZP6 322 aaKnown RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 CARFQ8N187 725 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 COX18Q8N8Q8 333 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 DYNC2LI1Q8TCX1 351 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 HOXB13Q92826 284 aaPredicted RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 EFHD2Q96C19 240 aaPredicted RBP12.68□□□□□ -0.38
SMG6-203ENST00000536871 CTHRC1Q96CG8 243 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 SLC6A18Q96N87 628 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 CD180Q99467 661 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 MCHR1Q99705 422 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 PELOQ9BRX2 385 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms