RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 FEN1P39748 380 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 PSG6Q00889 435 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 HEPACAMQ14CZ8 416 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 ACKR1Q16570 336 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 DESI1Q6ICB0 168 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 LETMD1Q6P1Q0 360 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 ZNF474Q6S9Z5 364 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 TIFABQ6ZNK6 161 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 CTAGE4Q8IX94 777 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 PRR22Q8IZ63 422 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 METTL25Q8N6Q8 603 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 OR52R1Q8NGF1 315 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 OR14L1PQ8NHC6 308 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 PPP1R14CQ8TAE6 165 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 ZNF592Q92610 1267 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 TMBIM1Q969X1 311 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 ATP6V1E2Q96A05 226 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 KLHL29Q96CT2 875 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 WFIKKN1Q96NZ8 548 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 NSUN5Q96P11 429 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 ZNF382Q96SR6 550 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 SLC39A3Q9BRY0 314 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 BDH2Q9BUT1 245 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 ZNF701Q9NV72 531 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 TAS2R9Q9NYW1 312 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 XPR1Q9UBH6 696 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 HEY2Q9UBP5 337 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 FBXL2Q9UKC9 423 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 GRID1Q9ULK0 1009 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 NFU1Q9UMS0 254 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 EIF3LQ9Y262 564 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 ABCA1O95477 2261 aa10.13□□□□□ -0.79
CLSTN3-206ENST00000535668 C7orf72A4D263 438 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 MYO1GB0I1T2 1018 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 PPP6CO00743 305 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 SMIM24O75264 130 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 KRT6AP02538 564 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 KRT6BP04259 564 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 NGFRP08138 427 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 GRK2P25098 689 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 DPP4P27487 766 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 CCKARP32238 428 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 MPIP34949 423 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 UGT2B10P36537 528 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 MAP3K8P41279 467 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 KRT6CP48668 564 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 AGFG1P52594 562 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 NAA20P61599 178 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 ETF1P62495 437 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 RAE1P78406 368 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 MRPS25P82663 173 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 EXOSC7Q15024 291 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 RASA2Q15283 850 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 SPIN4Q56A73 249 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 CLEC9AQ6UXN8 241 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 NPSR1Q6W5P4 371 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 EXOC3L1Q86VI1 746 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 C1orf52Q8N6N3 182 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 FAM76AQ8TAV0 307 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 SELENOMQ8WWX9 145 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 PHF21BQ96EK2 531 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 ADOQ96SZ5 270 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 TMEM204Q9BSN7 226 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 BRINP2Q9C0B6 783 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 SLC35C2Q9NQQ7 365 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 PLSCR4Q9NRQ2 329 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 FARSBQ9NSD9 589 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 FAM120CQ9NX05 1096 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 NINJ2Q9NZG7 142 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 CPSF2Q9P2I0 782 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 BCAP29Q9UHQ4 241 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 UTS2RQ9UKP6 389 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 C19orf53Q9UNZ5 99 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 SLC12A4Q9UP95 1085 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 MAPRE3Q9UPY8 281 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 STK38LQ9Y2H1 464 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 PRR14LQ5THK1 2151 aa10.12□□□□□ -0.79
CLSTN3-206ENST00000535668 RTTNQ86VV8 2226 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 PLCE1Q9P212 2302 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 FBN1P35555 2871 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 SLC22A20A6NK97 555 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 A8MT66 165 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 C16orf97H3BN30 126 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 H3BQF6 201 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 MANBAO00462 879 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 ERAL1O75616 437 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 REM1O75628 298 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 THBS1P07996 1170 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 NID1P14543 1247 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 STARP49675 285 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 MRPS35P82673 323 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 CLCQ05315 142 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 FAM27E3Q08E93 113 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 TTC19Q6DKK2 380 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 ADAM5Q6NVV9 412 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 DNAJC14Q6Y2X3 702 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 SH2D5Q6ZV89 423 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 LARP4Q71RC2 724 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 BTLAQ7Z6A9 289 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 LUZP2Q86TE4 346 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms