RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	TAGLN3	Q9UI15	199 aa		10.53	□□□□□ -0.72
CTNND1-238	ENST00000534647	MID2	Q9UJV3	735 aa		10.53	□□□□□ -0.72
CTNND1-238	ENST00000534647		A0A087X1B8	175 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	GLOD5	A6NK44	160 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	SUPT3H	B4E1H0	165 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	UBXN8	O00124	270 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	EBAG9	O00559	213 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	SUPT3H	O75486	399 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	PRKRA	O75569	313 aa	Known RBP	10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	SEMA3D	O95025	777 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	AIFM1	O95831	613 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	ABCB1	P08183	1280 aa	Predicted RBP	10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	S1PR1	P21453	382 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	PTPN6	P29350	595 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	SSTR4	P31391	388 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	MAGEA12	P43365	314 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	NAGLU	P54802	743 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	ALDH18A1	P54886	795 aa	Known RBP	10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	WNT3	P56703	355 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	EEF1A1	P68104	462 aa	Known RBP	10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	SNTA1	Q13424	505 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	DDX39B	Q13838	428 aa	Known RBP	10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	SETDB1	Q15047	1291 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	EEF1A1P5	Q5VTE0	462 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	HLA-DQA1	Q5Y7H0	255 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	ATG16L1	Q676U5	607 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	BICRAL	Q6AI39	1079 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	OR52E8	Q6IFG1	317 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	CYP20A1	Q6UW02	462 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	TMEM64	Q6YI46	380 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	NUP54	Q7Z3B4	507 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	CMC1	Q7Z7K0	106 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	ADGRE4P	Q86SQ3	457 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	TBC1D1	Q86TI0	1168 aa	Predicted RBP	10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	NUDT13	Q86X67	352 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	NUDCD3	Q8IVD9	361 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	ANKS4B	Q8N8V4	417 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	WFDC11	Q8NEX6	87 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	WDR20	Q8TBZ3	569 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	DOK4	Q8TEW6	326 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	SMPDL3B	Q92485	455 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	ZNF75CP	Q92670	426 aa	Predicted RBP	10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	TRIB1	Q96RU8	372 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	OR10A5	Q9H207	317 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	MANSC1	Q9H8J5	431 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	ACTR8	Q9H981	624 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	BRD7	Q9NPI1	651 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	BEX4	Q9NWD9	120 aa	Predicted RBP	10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	TEX10	Q9NXF1	929 aa	Predicted RBP	10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	ADAM29	Q9UKF5	820 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	CAMK2A	Q9UQM7	478 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	ACOT9	Q9Y305	439 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	SLC6A5	Q9Y345	797 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	SPEF1	Q9Y4P9	236 aa		10.52	□□□□□ -0.73
CTNND1-238	ENST00000534647	NCKAP5	O14513	1909 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	CLCA1	A8K7I4	914 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	PGRMC2	O15173	223 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	BIRC5	O15392	142 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	RCBTB2	O95199	551 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	LRAT	O95237	230 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	HRG	P04196	525 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	C2	P06681	752 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	DHRS4L1	P0CG22	281 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	COL6A2	P12110	1019 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	TAC1	P20366	129 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	PIK3R1	P27986	724 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	ABCD3	P28288	659 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	ETV4	P43268	484 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	PIK3CG	P48736	1102 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	LTB	Q06643	244 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	RCAN2	Q14206	197 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	ACAP2	Q15057	778 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	EIPR1	Q53HC9	387 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	FAM209A	Q5JX71	171 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	SHE	Q5VZ18	495 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	SLC30A6	Q6NXT4	461 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	CCDC197	Q8NCU1	140 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	OR4K14	Q8NGD5	310 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	OR1J4	Q8NGS1	313 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	LINC01560	Q8TB33	94 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	RAB3IL1	Q8TBN0	382 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	TRPC4AP	Q8TEL6	797 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	EXT2	Q93063	718 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	UCN3	Q969E3	161 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	NXNL1	Q96CM4	212 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	SERPINI1	Q99574	410 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	ELAC2	Q9BQ52	826 aa	Known RBP	10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	SFXN3	Q9BWM7	321 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	C12orf65	Q9H3J6	166 aa	Known RBP	10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	FGFR1OP2	Q9NVK5	253 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	CFL2	Q9Y281	166 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	ANGPTL3	Q9Y5C1	460 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	TNPO3	Q9Y5L0	923 aa	Known RBP	10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	NIN	Q8N4C6	2090 aa		10.51	□□□□□ -0.73
CTNND1-238	ENST00000534647	NSD1	Q96L73	2696 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647		A0A1W2PNR3	127 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	PLIN3	O60664	434 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	PPM1B	O75688	479 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	CBR3	O75828	277 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	BPGM	P07738	259 aa		10.5	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms