RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 TMEM198Q66K66 360 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 VASNQ6EMK4 673 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 B3GNT6Q6ZMB0 384 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 RGS9BPQ6ZS82 235 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 LARP4Q71RC2 724 aaKnown RBP eCLIP8.76□□□□□ -1.01
SSBP3-215ENST00000533946 NUP54Q7Z3B4 507 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 MARCH3Q86UD3 253 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 C9orf106Q8NAJ2 232 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 C17orf47Q8NEP4 570 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 TWIST2Q8WVJ9 160 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 CAVIN3Q969G5 261 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 GIMAP5Q96F15 307 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 TMEM41AQ96HV5 264 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 COL21A1Q96P44 957 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 TUBA1CQ9BQE3 449 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 OSBPL11Q9BXB4 747 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 METTL7AQ9H8H3 244 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 SIRT3Q9NTG7 399 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-215ENST00000533946 NMRK1Q9NWW6 199 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 C1orf109Q9NX04 203 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 MED11Q9P086 117 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 BOKQ9UMX3 212 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-215ENST00000533946 C19orf53Q9UNZ5 99 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-215ENST00000533946 CAMK2AQ9UQM7 478 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 RPH3AQ9Y2J0 694 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-215ENST00000533946 F8P00451 2351 aa8.76□□□□□ -1.01
SSBP3-215ENST00000533946 ITPR3Q14573 2671 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 NPIPA5A0A0B4J1W7 369 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 OR14I1A6ND48 311 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 SYNDIG1LA6NDD5 238 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 NPIPA7E9PJI5 369 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 TP53I11O14683 189 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 GUCY1B2O75343 617 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 CRCPO75575 148 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 OPN1LWP04000 364 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 BPGMP07738 259 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 NPIPA8P0DM63 369 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 LAMP1P11279 417 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 PRPH2P23942 346 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 MSX1P28360 303 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 CHRNB4P30926 498 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 MAP3K8P41279 467 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 NRG3P56975 720 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 XKR7Q5GH72 579 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 CCNJQ5T5M9 372 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 WDR93Q6P2C0 686 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 MTFR2Q6P444 385 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 PACS2Q86VP3 889 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 TRIM42Q8IWZ5 723 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 DDIASQ8IXT1 998 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 FAM9CQ8IZT9 166 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 OR1J4Q8NGS1 313 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 HSPBAP1Q96EW2 488 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 SLC35A4Q96G79 324 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 ZIM3Q96PE6 472 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 DSN1Q9H410 356 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 MKS1Q9NXB0 559 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 TAS2R7Q9NYW3 318 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 KLRF1Q9NZS2 232 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 PSME2Q9UL46 239 aa8.75□□□□□ -1.01
SSBP3-215ENST00000533946 ANKHD1Q8IWZ3 2542 aaKnown RBP8.74□□□□□ -1.01
SSBP3-215ENST00000533946 OR6C70A6NIJ9 312 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 C9JVG2 144 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 BCKDKO14874 412 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 TGM6O95932 706 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 FGF4P08620 206 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 GRK2P25098 689 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 CEACAM8P31997 349 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-215ENST00000533946 GABRA3P34903 492 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 LHX2P50458 406 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 SUCLG1P53597 346 aaKnown RBP8.74□□□□□ -1.01
SSBP3-215ENST00000533946 PRKAG1P54619 331 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 CASP9P55211 416 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 GFRA1P56159 465 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 TLE4Q04727 773 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 IFFO1Q0D2I5 559 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 PDE7AQ13946 482 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 HEPACAMQ14CZ8 416 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 DUSP5Q16690 384 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 GRAMD1BQ3KR37 738 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 C6orf136Q5SQH8 315 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 WLSQ5T9L3 541 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 FIGNL1Q6PIW4 674 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 PAOXQ6QHF9 649 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 DMRTC2Q8IXT2 367 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-215ENST00000533946 OR2L13Q8N349 312 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 LIX1Q8N485 282 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 ZNF781Q8N8C0 355 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 GATSQ8NAP1 163 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 SLC16A11Q8NCK7 471 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 OR4C3Q8NH37 302 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 DUSP19Q8WTR2 217 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 ABTB1Q969K4 478 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-215ENST00000533946 SARAFQ96BY9 339 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 CCDC126Q96EE4 140 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 TRIB1Q96RU8 372 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 SORT1Q99523 831 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 OR2B2Q9GZK3 357 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 PRDM14Q9GZV8 571 aa8.74□□□□□ -1.01
SSBP3-215ENST00000533946 KCNJ16Q9NPI9 418 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms