RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 NLKQ9UBE8 527 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 SLC9A8Q9Y2E8 581 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 PRRT4C9JH25 899 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 PCCBP05166 539 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 KELP23276 732 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 MAPK9P45984 424 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 QPRTQ15274 297 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 AMZ2Q86W34 360 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 FBXO15Q8NCQ5 510 aaPredicted RBP18.18■□□□□ 0.5
CAPN1-226ENST00000533820 PCNPQ8WW12 178 aaKnown RBP18.18■□□□□ 0.5
CAPN1-226ENST00000533820 DEDD2Q8WXF8 326 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 FBXW5Q969U6 566 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 RNF121Q9H920 327 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 NPAP1Q9NZP6 1156 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 A0A087WUU8 490 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 CD8B2A6NJW9 211 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 IL1AP01583 271 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 HMGN2P05204 90 aaKnown RBP18.17■□□□□ 0.5
CAPN1-226ENST00000533820 CD8BP10966 210 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 CPEP16870 476 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 MTNR1AP48039 350 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 TAS2R41P59536 307 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 XKRXQ6PP77 449 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 PRICKLE2Q7Z3G6 844 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 NUDT13Q86X67 352 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 Q8N402 240 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 OR2L2Q8NH16 312 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 TEX47Q8TBZ9 253 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 DOK4Q8TEW6 326 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 CLCA2Q9UQC9 943 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 GPR55Q9Y2T6 319 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-226ENST00000533820 IRAK3Q9Y616 596 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 LRRK1Q38SD2 2015 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 PGRMC2O15173 223 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 PAPLNO95428 1278 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 SLC2A2P11168 524 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-226ENST00000533820 IL12RB1P42701 662 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 CLCNKAP51800 687 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 TRIQKQ629K1 86 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 PLET1Q6UQ28 207 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 ARSKQ6UWY0 536 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 RRM2BQ7LG56 351 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 UBE3DQ7Z6J8 389 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 VWA5B2Q8N398 1253 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 C19orf18Q8NEA5 215 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 OR10Z1Q8NGY1 313 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 MRPL39Q9NYK5 338 aaKnown RBP18.17■□□□□ 0.5
CAPN1-226ENST00000533820 TESQ9UGI8 421 aaKnown RBP18.17■□□□□ 0.5
CAPN1-226ENST00000533820 KIAA0100Q14667 2235 aaKnown RBP18.17■□□□□ 0.5
CAPN1-226ENST00000533820 TSPAN11A1L157 253 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 FAM170BA6NMN3 283 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 KIAA0355O15063 1070 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 SMSP52788 366 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 SMIM11AP58511 58 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 DHCR24Q15392 516 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 SLC35F1Q5T1Q4 408 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 LCTLQ6UWM7 567 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 TMEM107Q6UX40 140 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 FAM92BQ6ZTR7 304 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 GRASPQ7Z6J2 395 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-226ENST00000533820 OR8K5Q8NH50 307 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 ARSGQ96EG1 525 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 WDFY2Q96P53 400 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 NFKBIL1Q9UBC1 381 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-226ENST00000533820 NDOR1Q9UHB4 597 aa18.17■□□□□ 0.5
CAPN1-226ENST00000533820 RANBP2P49792 3224 aaKnown RBP18.16■□□□□ 0.5
CAPN1-226ENST00000533820 COL4A6Q14031 1691 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 A0A1W2PRQ8 180 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 FAM183AA6NL82 134 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 GPR4P46093 362 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 CCR8P51685 355 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 DUSP2Q05923 314 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 ASAH1Q13510 395 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 TATDN3Q17R31 274 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 VRK2Q86Y07 508 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 BBS1Q8NFJ9 593 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 SETD7Q8WTS6 366 aaKnown RBP18.16■□□□□ 0.5
CAPN1-226ENST00000533820 UFD1Q92890 307 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 AMDHD1Q96NU7 426 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 TBX5Q99593 518 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 GDF15Q99988 308 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 RNF208Q9H0X6 261 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 FANCFQ9NPI8 374 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 GSAPA4D1B5 854 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 SLC2A10O95528 541 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 SDHBP21912 280 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 PLK5Q496M5 336 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 ZNF730Q6ZMV8 503 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 MARCH9Q86YJ5 346 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 DCUN1D3Q8IWE4 304 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 LINC00518Q8N0U6 118 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 ZFPM2Q8WW38 1151 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 LIN7BQ9HAP6 207 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 ZSCAN32Q9NX65 697 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 ZNF224Q9NZL3 707 aa18.16■□□□□ 0.5
CAPN1-226ENST00000533820 MRPS7Q9Y2R9 242 aaKnown RBP18.16■□□□□ 0.5
CAPN1-226ENST00000533820 TRPM6Q9BX84 2022 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 LOC102723532A0A0G2JNH3 316 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 SHISA3A0PJX4 238 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 ARHGEF9O43307 516 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms