RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 TRIM46Q7Z4K8 759 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 SLC44A2Q8IWA5 706 aaPredicted RBP11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 OR7G2Q8NG99 324 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 CDC26Q8NHZ8 85 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 RDH11Q8TC12 318 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 METTL2AQ96IZ6 378 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 ZFP3Q96NJ6 502 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 TM9SF2Q99805 663 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 SH3GL2Q99962 352 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 OR2B2Q9GZK3 357 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 FOLH1BQ9HBA9 442 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 TAS2R7Q9NYW3 318 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 CRIM1Q9NZV1 1036 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 EMCNQ9ULC0 261 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 WIF1Q9Y5W5 379 aa11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 NIPBLQ6KC79 2804 aaeCLIP11.29□□□□□ -0.6
CAPRIN1-213ENST00000533562 A0A087WV62 115 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 TUBAL3A6NHL2 446 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 H0Y3Z8 333 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 GPR37O15354 613 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 PROCP04070 461 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 JUNP05412 331 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 TMIGD3P0DMS9 266 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 CPA3P15088 417 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 CHMP24386 653 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 NTSP30990 170 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 CRHR1P34998 444 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 ART1P52961 327 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 FOXA1P55317 472 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 GFRA1P56159 465 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 EEF1A1P68104 462 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 DAZAP2Q15038 168 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 CYP27C1Q4G0S4 372 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 EEF1A1P5Q5VTE0 462 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 FAM71E1Q6IPT2 247 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 FRMD7Q6ZUT3 714 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 SH2D5Q6ZV89 423 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 CCDC63Q8NA47 563 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 GOT1L1Q8NHS2 421 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 UBLCP1Q8WVY7 318 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 NINJ1Q92982 152 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 WNT2BQ93097 391 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 UCN2Q96RP3 112 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 CLEC4MQ9H2X3 399 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 ACBD3Q9H3P7 528 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 MYNNQ9NPC7 610 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 SDHAF3Q9NRP4 125 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 RASSF1Q9NS23 344 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 OXSMQ9NWU1 459 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 DKKL1Q9UK85 242 aa11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 MRTO4Q9UKD2 239 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-213ENST00000533562 DOCK7Q96N67 2140 aa11.27□□□□□ -0.6
CAPRIN1-213ENST00000533562 HRNRQ86YZ3 2850 aaPredicted RBP11.27□□□□□ -0.6
CAPRIN1-213ENST00000533562 FAM221AA4D161 298 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 A6NNC1 897 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 EEF1E1-BLOC1S5C9J1V9 151 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 PLOD2O00469 737 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 COPEO14579 308 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 EEF1E1O43324 174 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 PLIN3O60664 434 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 SEC22BO75396 215 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 NME6O75414 186 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 RSL1D1O76021 490 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 RCBTB2O95199 551 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 UROSP10746 265 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 EPXP11678 715 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 GRK2P25098 689 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 DPP4P27487 766 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 CLK3P49761 638 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 AGFG1P52594 562 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 DSCR4P56555 118 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 RIPPLY3P57055 190 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 ZNF155Q12901 538 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 GAB1Q13480 694 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 ZNHIT3Q15649 155 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 BCL2A1Q16548 175 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 DECR1Q16698 335 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 SH2D4BQ5SQS7 431 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 OR5M10Q6IEU7 315 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 NOXRED1Q6NXP6 359 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 NPSR1Q6W5P4 371 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 IKBIPQ70UQ0 350 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 CHMP1BQ7LBR1 199 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 TDRPQ86YL5 185 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 C9orf106Q8NAJ2 232 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 OR4K17Q8NGC6 315 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 OR4N2Q8NGD1 307 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 EFHD2Q96C19 240 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 RMND5BQ96G75 393 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 SFXN2Q96NB2 322 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 TUBA1CQ9BQE3 449 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 GPATCH1Q9BRR8 931 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 SFXN3Q9BWM7 321 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 IQCGQ9H095 443 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 FBXL2Q9UKC9 423 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 C19orf53Q9UNZ5 99 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 POLR3HQ9Y535 204 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 NF1P21359 2839 aa11.27□□□□□ -0.61
CAPRIN1-213ENST00000533562 PRRC2AP48634 2157 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms