RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 CHST11Q9NPF2 352 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 FAM207AQ9NSI2 230 aaPredicted RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 PARPBPQ9NWS1 579 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 MTMR10Q9NXD2 777 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SMPXQ9UHP9 88 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ADAM28Q9UKQ2 775 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 TSPAN16Q9UKR8 245 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SCML1Q9UN30 329 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ST3GAL5Q9UNP4 418 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 MOKQ9UQ07 419 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 CHST2Q9Y4C5 530 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 PCYT1BQ9Y5K3 369 aaPredicted RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 MTCH2Q9Y6C9 303 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 TULP4Q9NRJ4 1543 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 DDX60Q8IY21 1712 aaKnown RBP5.17□□□□□ -1.58
CD44-236ENST00000533222 PIK3C2BO00750 1634 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 PRSS29PA6NIE9 313 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 A8MUA0 341 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 PTGES3LE9PB15 166 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 F8VP50 259 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 NPIPB9F8W1W9 429 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 M0QZ92 97 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 NR5A2O00482 541 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 BHLHE40O14503 412 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 CCSO14618 274 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 MSH4O15457 936 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 CHST10O43529 356 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 TLX2O43763 284 aaPredicted RBP5.17□□□□□ -1.58
CD44-236ENST00000533222 GLRA3O75311 464 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 LRCH4O75427 683 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 ZMPSTE24O75844 475 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 SC5DO75845 299 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 SNAI1O95863 264 aaPredicted RBP5.17□□□□□ -1.58
CD44-236ENST00000533222 GLUD1P00367 558 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 IGHV2-5P01817 119 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 C9P02748 559 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 ALPLP05186 524 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 CSF3P09919 207 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 NR2C1P13056 603 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 HOXB6P17509 224 aaKnown RBP5.17□□□□□ -1.58
CD44-236ENST00000533222 RHCEP18577 417 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 RAB3BP20337 219 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 PRKCHP24723 683 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 ZFP36P26651 326 aaKnown RBP5.17□□□□□ -1.58
CD44-236ENST00000533222 ACADLP28330 430 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 SDC4P31431 198 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 RYKP34925 604 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 TAGLN2P37802 199 aaKnown RBP5.17□□□□□ -1.58
CD44-236ENST00000533222 GRIA1P42261 906 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 PTGER3P43115 390 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 PITPNBP48739 271 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 BTG1P62324 171 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 TRA2BP62995 288 aaKnown RBP5.17□□□□□ -1.58
CD44-236ENST00000533222 GPC5P78333 572 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 DLK1P80370 383 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 TFAMQ00059 246 aaKnown RBP5.17□□□□□ -1.58
CD44-236ENST00000533222 SP2Q02086 613 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 TLE4Q04727 773 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 EMX2Q04743 252 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 GABPAQ06546 454 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 GPS1Q13098 491 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 RPA4Q13156 261 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 SLC13A2Q13183 592 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 IL18R1Q13478 541 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 AQP6Q13520 282 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 GANABQ14697 944 aaKnown RBP5.17□□□□□ -1.58
CD44-236ENST00000533222 GUK1Q16774 197 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 NRN1LQ496H8 165 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 VPS26BQ4G0F5 336 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 NHLRC3Q5JS37 347 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 C1orf141Q5JVX7 400 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 EPHA10Q5JZY3 1008 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 KCTD11Q693B1 232 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 XAF1Q6GPH4 301 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 TANGO2Q6ICL3 276 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 LRRC8EQ6NSJ5 796 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 TAF2Q6P1X5 1199 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 VWA1Q6PCB0 445 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 ZCCHC12Q6PEW1 402 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 RHBDF2Q6PJF5 856 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 BTNL3Q6UXE8 466 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 NPNTQ6UXI9 565 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 BAIAP2L2Q6UXY1 529 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 GDPD4Q6W3E5 623 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 SCARA5Q6ZMJ2 495 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 FAM183BPQ6ZVS7 135 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 VASH2Q86V25 355 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 TGIF2LXQ8IUE1 241 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 C1orf210Q8IVY1 113 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 CFAP206Q8IYR0 622 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 SVBPQ8N300 66 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 MTURNQ8N3F0 131 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 GPR137CQ8N3F9 429 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 PRSS35Q8N3Z0 413 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 LRRC57Q8N9N7 239 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 AQP11Q8NBQ7 271 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 ZNF248Q8NDW4 579 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 DUSP18Q8NEJ0 188 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 OR5D18Q8NGL1 313 aa5.17□□□□□ -1.58
CD44-236ENST00000533222 OR5R1Q8NH85 324 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms