RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 FRG2CA6NGY1 282 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 TTC36A6NLP5 189 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 CXCR6O00574 342 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 CIB2O75838 187 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 H6PDO95479 791 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 SERPINA7P05543 415 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 CHRM4P08173 479 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 PCGF2P35227 344 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 EIF2S3P41091 472 aaKnown RBP17.61■□□□□ 0.41
SMPD1-205ENST00000531303 ERFP50548 548 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 MRPS22P82650 360 aaKnown RBP17.61■□□□□ 0.41
SMPD1-205ENST00000531303 RBBP4Q09028 425 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 CDC20Q12834 499 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 TRIM25Q14258 630 aaKnown RBP17.61■□□□□ 0.41
SMPD1-205ENST00000531303 MAPK11Q15759 364 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 DCST2Q5T1A1 773 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 HMGN2P46Q86SG4 172 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 SPACA3Q8IXA5 215 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 SIRT6Q8N6T7 355 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 ZNF441Q8N8Z8 693 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 NUBPLQ8TB37 319 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 THAP4Q8WY91 577 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 ATP13A2Q9NQ11 1180 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 DKK4Q9UBT3 224 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 LIPT1Q9Y234 373 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 ANGPT4Q9Y264 503 aa17.61■□□□□ 0.41
SMPD1-205ENST00000531303 CFAP73A6NFT4 308 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 TMEM200CA6NKL6 621 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 GMNNO75496 209 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 KCNK2O95069 426 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 GGT1P19440 569 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 ITGA3P26006 1051 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 TRHRP34981 398 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-205ENST00000531303 HPCAP84074 193 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 BNIP2Q12982 314 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 DEFB109BQ30KR1 87 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 ARHGAP11BQ3KRB8 267 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 GLYATQ6IB77 296 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 HEPHL1Q6MZM0 1159 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 REEP3Q6NUK4 255 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 CYP2R1Q6VVX0 501 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 BCORP1Q8N888 145 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 OR8K3Q8NH51 312 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 BRIX1Q8TDN6 353 aaKnown RBP17.6■□□□□ 0.41
SMPD1-205ENST00000531303 TMBIM1Q969X1 311 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 SDF2Q99470 211 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 CDCP1Q9H5V8 836 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 MYOTQ9UBF9 498 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 SUCOQ9UBS9 1254 aaKnown RBP17.6■□□□□ 0.41
SMPD1-205ENST00000531303 POMPQ9Y244 141 aa17.6■□□□□ 0.41
SMPD1-205ENST00000531303 CELSR3Q9NYQ7 3312 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 IGF2RP11717 2491 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 A6NL46 340 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 C1QTNF9BB2RNN3 333 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 ARPC2O15144 300 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 RRP8O43159 456 aaKnown RBP17.59■□□□□ 0.41
SMPD1-205ENST00000531303 MAN1A2O60476 641 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 FCMRO60667 390 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 REM1O75628 298 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 OR2J2O76002 312 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 IGKV1D-16P01601 117 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 C1QTNF9P0C862 333 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 CHRNEQ04844 493 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 AIMP2Q13155 320 aaKnown RBP17.59■□□□□ 0.41
SMPD1-205ENST00000531303 CYP27C1Q4G0S4 372 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 C1orf146Q5VVC0 180 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 CLEC1AQ8NC01 280 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 HIPK4Q8NE63 616 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 FAM162AQ96A26 154 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 TP53INP1Q96A56 240 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 EFHD2Q96C19 240 aaPredicted RBP17.59■□□□□ 0.41
SMPD1-205ENST00000531303 TRNT1Q96Q11 434 aaKnown RBP17.59■□□□□ 0.41
SMPD1-205ENST00000531303 TREX2Q9BQ50 279 aaPredicted RBP17.59■□□□□ 0.41
SMPD1-205ENST00000531303 RUBCNLQ9H714 662 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 MKLN1Q9UL63 735 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 POLHQ9Y253 713 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 RAXQ9Y2V3 346 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 SNX13Q9Y5W8 968 aa17.59■□□□□ 0.41
SMPD1-205ENST00000531303 ASPMQ8IZT6 3477 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 NPIPA5A0A0B4J1W7 369 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 NPIPA7E9PJI5 369 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 ZNF354AO60765 605 aaPredicted RBP17.58■□□□□ 0.41
SMPD1-205ENST00000531303 SOX30O94993 753 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 STAMBPO95630 424 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 NPIPA8P0DM63 369 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 ATP6V1C1P21283 382 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 PIGAP37287 484 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 CRISP3P54108 245 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 PLCXD2Q0VAA5 305 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 RAPSNQ13702 412 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 GNA13Q14344 377 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 GPR68Q15743 365 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 DECR1Q16698 335 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 LRRC23Q53EV4 343 aaPredicted RBP17.58■□□□□ 0.41
SMPD1-205ENST00000531303 B3GNTL1Q67FW5 361 aaPredicted RBP17.58■□□□□ 0.41
SMPD1-205ENST00000531303 CCDC81Q6ZN84 652 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 ZAR1Q86SH2 424 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 RPS19BP1Q86WX3 136 aaKnown RBP17.58■□□□□ 0.41
SMPD1-205ENST00000531303 DHFR2Q86XF0 187 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 SPPL2CQ8IUH8 684 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms