RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 IFT22Q9H7X7 185 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SRA1Q9HD15 236 aaKnown RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TDP1Q9NUW8 608 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 CNTN3Q9P232 1028 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 CACNG2Q9Y698 323 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TRAV18A0A075B6X5 111 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 TRBV2A0A0J9YWF9 115 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 C17orf112F2Z3M2 114 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SOD2P04179 222 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 MRPL3P09001 348 aaKnown RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 CKMT1AP12532 417 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 PYCR1P32322 319 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 GMPRP36959 345 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 MAP2K4P45985 399 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 EPHA4P54764 986 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 MRPS34P82930 218 aaKnown RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SLAMF1Q13291 335 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SLC35F1Q5T1Q4 408 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 HEPHL1Q6MZM0 1159 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SLC27A4Q6P1M0 643 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 TPRG1Q6ZUI0 275 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 Q7L0L9 218 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 PRR22Q8IZ63 422 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SLC24A4Q8NFF2 622 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 OR5M8Q8NGP6 311 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF461Q8TAF7 563 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SMAP2Q8WU79 429 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 C10orf82Q8WW14 230 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF582Q96NG8 517 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 NICN1Q9BSH3 213 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 KATNB1Q9BVA0 655 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 PBX4Q9BYU1 374 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SEMA4CQ9C0C4 833 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ADAMTS10Q9H324 1103 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 NT5DC2Q9H857 520 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 AGO3Q9H9G7 860 aaKnown RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 NMUR1Q9HB89 426 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 RAB18Q9NP72 206 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 CDC14AQ9UNH5 594 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ACKR2O00590 384 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 RNF13O43567 381 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF217O75362 1048 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ESR1P03372 595 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 IRF2P14316 349 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ACPPP15309 386 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 TAL1P17542 331 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 EDNRBP24530 442 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 IMPA1P29218 277 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 TAGLN2P37802 199 aaKnown RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 GIPRP48546 466 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 MGAT3Q09327 533 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 CLINT1Q14677 625 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 CLEC9AQ6UXN8 241 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 PRSS58Q8IYP2 241 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF454Q8N9F8 522 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 CHFRQ96EP1 664 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SENP8Q96LD8 212 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 TTTY10Q9BZA0 68 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 MINDY3Q9H8M7 445 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ACOT13Q9NPJ3 140 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 KIAA1522Q9P206 1035 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 COPS3Q9UNS2 423 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 A0A1W2PPK0 400 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 MEGF11A6BM72 1044 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 CD8B2A6NJW9 211 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 PPP5D1E7EU14 171 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 BCAS2O75934 225 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 CNTN5O94779 1100 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM63AO94886 807 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SNAI1O95863 264 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 HPRP00739 348 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 CD8BP10966 210 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 LAP3P28838 519 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 BMXP51813 675 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 NR0B1P51843 470 aaKnown RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 FXYD4P59646 89 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 GABARAPL2P60520 117 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 RAP2BP61225 183 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 PPP1R8Q12972 351 aaKnown RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 MALLQ13021 153 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 DECR1Q16698 335 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 OR10K2Q6IF99 312 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 NOXRED1Q6NXP6 359 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 RHBDF2Q6PJF5 856 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 WDR74Q6RFH5 385 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF783Q6ZMS7 281 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SERINC5Q86VE9 423 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 COMMD1Q8N668 190 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SLC15A4Q8N697 577 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 OR13C9Q8NGT0 318 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 OR51Q1Q8NH59 317 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 TFGQ92734 400 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 KCNJ9Q92806 393 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 FKBP10Q96AY3 582 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 SGK3Q96BR1 496 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 ELP4Q96EB1 424 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 REEP6Q96HR9 211 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 NOL4LQ96MY1 436 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-229ENST00000531014 TSSK2Q96PF2 358 aa6.89□□□□□ -1.31
CTNND1-229ENST00000531014 PRRT1Q99946 306 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms