RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ALOX12P18054 663 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 GABRB1P18505 474 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 AGXTP21549 392 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 CPN2P22792 545 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 ELAVL4P26378 380 aaKnown RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 CERS1P27544 350 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 ALDH4A1P30038 563 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 FMO3P31513 532 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 ACSL1P33121 698 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 UGT2B10P36537 528 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 POLR2IP36954 125 aaKnown RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 OR1E2P47887 323 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 MAN2A2P49641 1150 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 PPP1R8Q12972 351 aaKnown RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 BIKQ13323 160 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 SMAD4Q13485 552 aaKnown RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 PUM1Q14671 1186 aaKnown RBP eCLIP5.21□□□□□ -1.58
PCF11-205ENST00000530906 TRAM2Q15035 370 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 TCEA2Q15560 299 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 MAPK11Q15759 364 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 CTF1Q16619 201 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 DGUOKQ16854 277 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 HEPHL1Q6MZM0 1159 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 CDC73Q6P1J9 531 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 KLHL17Q6TDP4 642 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 CASP12Q6UXS9 341 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 GDPGP1Q6ZNW5 385 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 SLC16A12Q6ZSM3 486 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 Q6ZSR6 202 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 LCNL1Q6ZST4 164 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 C22orf34Q6ZV56 151 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 SYT13Q7L8C5 426 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 ZNF367Q7RTV3 350 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 CCDC71Q8IV32 467 aaPredicted RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 MMP21Q8N119 569 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 CARFQ8N187 725 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 OR2L13Q8N349 312 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 SLC43A2Q8N370 569 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 STX19Q8N4C7 294 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 CLDN22Q8N7P3 220 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 SMYD1Q8NB12 490 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 AQP11Q8NBQ7 271 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 NUP43Q8NFH3 380 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 KBTBD8Q8NFY9 601 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 GPR32P1Q8NGA4 272 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 OR4E2Q8NGC2 313 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 OR8J1Q8NGP2 316 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 RPLP0P6Q8NHW5 317 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 FLVCR1-AS1Q8TAF5 88 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 BAHD1Q8TBE0 780 aaPredicted RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 TBC1D15Q8TC07 691 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 ADAMTS15Q8TE58 950 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 UTP15Q8TED0 518 aaKnown RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 APH1BQ8WW43 257 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 XAGE5Q8WWM1 108 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 FAM3CQ92520 227 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 SLC38A4Q969I6 547 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 SLC35B4Q969S0 331 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 YIPF6Q96EC8 236 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 CNRIP1Q96F85 164 aaPredicted RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 C10orf90Q96M02 699 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 DACH2Q96NX9 599 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 OR2A14Q96R47 310 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 STACQ99469 402 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 FNDC11Q9BVV2 318 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 ITPAQ9BY32 194 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 POLDIP3Q9BY77 421 aaKnown RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 FOXQ1Q9C009 403 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 WDR12Q9GZL7 423 aaKnown RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 CCDC90BQ9GZT6 254 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 AICDAQ9GZX7 198 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 CHRNA10Q9GZZ6 450 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 KLHL31Q9H511 634 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 ARMC7Q9H6L4 198 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 MTHFD2LQ9H903 347 aaPredicted RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 KCNK12Q9HB15 430 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 HMG20AQ9NP66 347 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 FZD3Q9NPG1 666 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 DUSP22Q9NRW4 184 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 TBCCD1Q9NVR7 557 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 PAK1IP1Q9NWT1 392 aaPredicted RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 SPHK1Q9NYA1 384 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 CPNE7Q9UBL6 633 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 TRPC4Q9UBN4 977 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 APOBEC3BQ9UH17 382 aaKnown RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 MKLN1Q9UL63 735 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 DAPP1Q9UN19 280 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 DUSP12Q9UNI6 340 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 MRPS17Q9Y2R5 130 aaKnown RBP5.21□□□□□ -1.58
PCF11-205ENST00000530906 ATG4BQ9Y4P1 393 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 F5P12259 2224 aa5.21□□□□□ -1.58
PCF11-205ENST00000530906 MDC1Q14676 2089 aaKnown RBP5.2□□□□□ -1.58
PCF11-205ENST00000530906 A0A1W2PPC4 97 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 LILRA5A6NI73 299 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 BTN3A3O00478 584 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 FFAR1O14842 300 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PCDH17O14917 1159 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 PGRMC2O15173 223 aa5.2□□□□□ -1.58
PCF11-205ENST00000530906 OR10H3O60404 316 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms