RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ECH1Q13011 328 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 MPP2Q14168 576 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 TTC9BQ8N6N2 239 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 METTL25Q8N6Q8 603 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 HORMAD2Q8N7B1 307 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 PHOSPHO2Q8TCD6 241 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 TCEAL4Q96EI5 215 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 TRMT2BQ96GJ1 504 aaKnown RBP8.03□□□□□ -1.12
CTNND1-227ENST00000530748 PHOX2BQ99453 314 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 FAM86C1Q9NVL1 165 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 COPZ2Q9P299 210 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 MGAT4CQ9UBM8 478 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 MBLAC1A4D2B0 266 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-227ENST00000530748 FGL2Q14314 439 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 KIR2DS3Q14952 304 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 FAM205BPQ63HN1 556 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 LETMD1Q6P1Q0 360 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 Q6ZSR6 202 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 OR4K13Q8NH42 304 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 MAL2Q969L2 176 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 ZNF285Q96NJ3 590 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 MGLLQ99685 303 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 ALOXE3Q9BYJ1 711 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 ZNF442Q9H7R0 627 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 GDE1Q9NZC3 331 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 ANKMY1Q9P2S6 941 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 A8MV72 311 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-227ENST00000530748 C17orf105B2RV13 164 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 FGF4P08620 206 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 PABPC4LP0CB38 370 aaKnown RBP8.03□□□□□ -1.12
CTNND1-227ENST00000530748 RAC2P15153 192 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 IL1RNP18510 177 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 ARL3P36405 182 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 CDKN2CP42773 168 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 MTNR1AP48039 350 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 VEGFBP49765 207 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 CTXN1P60606 82 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 SELENOWP63302 87 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 DSC1Q08554 894 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 EEF1A1P5Q5VTE0 462 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 XKR5Q6UX68 686 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 HSD11B1LQ7Z5J1 315 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 GALNT10Q86SR1 603 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 TSPYL5Q86VY4 417 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-227ENST00000530748 ACBD7Q8N6N7 88 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 CHFRQ96EP1 664 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 PREBQ9HCU5 417 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 ACOT13Q9NPJ3 140 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 ARMC1Q9NVT9 282 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 SMOXQ9NWM0 555 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 ATXN7L1Q9ULK2 861 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-227ENST00000530748 C4AP0C0L4 1744 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 B8ZZF3 427 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 LATO43561 262 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 CPNE6O95741 557 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 CSF2P04141 144 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 RETP07949 1114 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 CRABP1P29762 137 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 PYCR1P32322 319 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 WDR5P61964 334 aaKnown RBP8.03□□□□□ -1.12
CTNND1-227ENST00000530748 SF3B4Q15427 424 aaKnown RBP eCLIP8.03□□□□□ -1.121e-7■■■□□ 16.9
CTNND1-227ENST00000530748 DCST2Q5T1A1 773 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 GSG1LQ6UXU4 331 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 TMEM151BQ8IW70 566 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 NAGSQ8N159 534 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 CDRT4Q8N9R6 151 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 ZFAND2BQ8WV99 257 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 OR4K3Q96R72 315 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 POTEKPQ9BYX7 375 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 TMEM185BQ9H7F4 350 aa8.03□□□□□ -1.12
CTNND1-227ENST00000530748 SGK494L7N484 410 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 CASC3O15234 703 aaKnown RBP8.02□□□□□ -1.12
CTNND1-227ENST00000530748 UBL4AP11441 157 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 SLC2A5P22732 501 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 CD34P28906 385 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 HTR3AP46098 478 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 LSSP48449 732 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 SNU13P55769 128 aaKnown RBP8.02□□□□□ -1.12
CTNND1-227ENST00000530748 CDK3Q00526 305 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 TDGQ13569 410 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 MFSD13AQ14CX5 517 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 DEFB110Q30KQ9 67 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 CMPK2Q5EBM0 449 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 RANBP10Q6VN20 620 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 VTCN1Q7Z7D3 282 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 DCP2Q8IU60 420 aaKnown RBP8.02□□□□□ -1.12
CTNND1-227ENST00000530748 SLC39A11Q8N1S5 342 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 MS4A15Q8N5U1 240 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 BOLLQ8N9W6 283 aaKnown RBP8.02□□□□□ -1.12
CTNND1-227ENST00000530748 TM9SF4Q92544 642 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 DTD2Q96FN9 168 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 SAMD8Q96LT4 415 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 ZNF778Q96MU6 729 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 TMEM181Q9P2C4 612 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 HSFX1Q9UBD0 423 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 EBF1Q9UH73 591 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 POU2F3Q9UKI9 436 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 PCDHGA6Q9Y5G7 932 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 ENPP4Q9Y6X5 453 aa8.02□□□□□ -1.12
CTNND1-227ENST00000530748 I3L521 148 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms