RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 LHX3Q9UBR4 397 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 LCTP09848 1927 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 EEF1E1O43324 174 aaKnown RBP16.9■□□□□ 0.3
LTBP3-210ENST00000528516 HBA1P69905 142 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 PRR5P85299 388 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 ZNF155Q12901 538 aaPredicted RBP16.9■□□□□ 0.3
LTBP3-210ENST00000528516 COL28A1Q2UY09 1125 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 SLC8B1Q6J4K2 584 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 COX18Q8N8Q8 333 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 GATSQ8NAP1 163 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 SNX33Q8WV41 574 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 UFD1Q92890 307 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 C7orf34Q96L11 122 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 LRR1Q96L50 414 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 ZSWIM3Q96MP5 696 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 MS4A7Q9GZW8 240 aaPredicted RBP16.9■□□□□ 0.3
LTBP3-210ENST00000528516 TAPBPO15533 448 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 CCL5P13501 91 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 GDI1P31150 447 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 ACVR1Q04771 509 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 ZNF91Q05481 1191 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 RTL4Q6ZR62 310 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 OR2T35Q8NGX2 323 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 PIGXQ8TBF5 258 aa16.9■□□□□ 0.3
LTBP3-210ENST00000528516 ERMAPQ96PL5 475 aaPredicted RBP16.9■□□□□ 0.3
LTBP3-210ENST00000528516 QRSL1Q9H0R6 528 aaKnown RBP16.9■□□□□ 0.3
LTBP3-210ENST00000528516 TTYH1Q9H313 450 aaPredicted RBP16.9■□□□□ 0.3
LTBP3-210ENST00000528516 STX11O75558 287 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 TPMTP51580 245 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 SELENOWP63302 87 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 NTRK2Q16620 822 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 SLC5A12Q1EHB4 618 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 MLIPQ5VWP3 458 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 MTFR2Q6P444 385 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 TMEM19Q96HH6 336 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 NMNAT1Q9HAN9 279 aaPredicted RBP16.89■□□□□ 0.29
LTBP3-210ENST00000528516 MARCH5Q9NX47 278 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 ELF5Q9UKW6 265 aaPredicted RBP16.89■□□□□ 0.29
LTBP3-210ENST00000528516 DAPL1A0PJW8 107 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 GASTP01350 101 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 APOC3P02656 99 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 ADRA2AP08913 450 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 TSPAN5P62079 268 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 RGNQ15493 299 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 HLA-DQA1Q5Y7H0 255 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 LRRTM4Q86VH4 590 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 LIX1LQ8IVB5 337 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 C7orf61Q8IZ16 206 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 CLDN22Q8N7P3 220 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 UQCC2Q9BRT2 126 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 SLC12A9Q9BXP2 914 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 IFT46Q9NQC8 304 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 PFDN2Q9UHV9 154 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 NEU3Q9UQ49 428 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 APC2O95996 2303 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 WASH4PA8MWX3 477 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 J3QLW9 94 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 HBQ1P09105 142 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 ZNF19P17023 458 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 GPR4P46093 362 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 CDH11P55287 796 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 ERVFC1P60507 584 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 DSC1Q08554 894 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 ZNF805Q5CZA5 627 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 MANEALQ5VSG8 457 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 ZC3H14Q6PJT7 736 aaKnown RBP16.89■□□□□ 0.29
LTBP3-210ENST00000528516 FRRS1Q6ZNA5 592 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 KANSL1Q7Z3B3 1105 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 TAF8Q7Z7C8 310 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 RGMAQ96B86 450 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 KATNB1Q9BVA0 655 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 CNIH4Q9P003 139 aa16.89■□□□□ 0.29
LTBP3-210ENST00000528516 PLEKHB1Q9UF11 243 aaPredicted RBP16.89■□□□□ 0.29
LTBP3-210ENST00000528516 TRIM77I1YAP6 450 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 CSNK2A2P19784 350 aaPredicted RBP16.88■□□□□ 0.29
LTBP3-210ENST00000528516 ZNHIT3Q15649 155 aaPredicted RBP16.88■□□□□ 0.29
LTBP3-210ENST00000528516 HYAL4Q2M3T9 481 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 TMEM107Q6UX40 140 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 GAREM2Q75VX8 874 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 NXPE2Q96DL1 559 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 CCL27Q9Y4X3 112 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 TEX13CA0A0J9YWL9 993 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 FAM86C2PA6NEL3 165 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 EPCAMP16422 314 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 MAZP56270 477 aaKnown RBP16.88■□□□□ 0.29
LTBP3-210ENST00000528516 AKIRIN2Q53H80 203 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 TMEM31Q5JXX7 168 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 BHLHA9Q7RTU4 235 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 OR8K3Q8NH51 312 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 HERVK_113Q902F9 699 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 KLF16Q9BXK1 252 aaPredicted RBP16.88■□□□□ 0.29
LTBP3-210ENST00000528516 OR51J1Q9H342 316 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 B3GAT2Q9NPZ5 323 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 ZMAT5Q9UDW3 170 aaKnown RBP16.88■□□□□ 0.29
LTBP3-210ENST00000528516 PCDHGB7Q9Y5F8 929 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 HRH3Q9Y5N1 445 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 TPOP07202 933 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 SLC35G6P0C7Q6 338 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 CBSLP0DN79 551 aa16.88■□□□□ 0.29
LTBP3-210ENST00000528516 AHCYP23526 432 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms