RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 SMURF2Q9HAU4 748 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 HCN3Q9P1Z3 774 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 MBD2Q9UBB5 411 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 CNOT11Q9UKZ1 510 aaKnown RBP7.23□□□□□ -1.25
SOX6-211ENST00000528429 SLC22A7Q9Y694 548 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 CEP192Q8TEP8 1941 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 CPED1A4D0V7 1026 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 TLCD2A6NGC4 264 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 UPK1AO00322 258 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 HMGN4O00479 90 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 GOSR1O95249 250 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 CLIC3O95833 236 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 HMGN2P05204 90 aaKnown RBP7.23□□□□□ -1.25
SOX6-211ENST00000528429 NR2F1P10589 423 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 MATN1P21941 496 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 EMP3P54852 163 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 P2RX3P56373 397 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 MAT1AQ00266 395 aaKnown RBP7.23□□□□□ -1.25
SOX6-211ENST00000528429 SNTA1Q13424 505 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 PLK5Q496M5 336 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 REEP3Q6NUK4 255 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 IGF2-ASQ6U949 168 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 WDR5BQ86VZ2 330 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 C17orf82Q86X59 251 aaPredicted RBP7.23□□□□□ -1.25
SOX6-211ENST00000528429 LINC00518Q8N0U6 118 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 TMEM52Q8NDY8 209 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 OR6S1Q8NH40 331 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 GAB3Q8WWW8 586 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 METTL21AQ8WXB1 218 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 EDAQ92838 391 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 C16orf58Q96GQ5 468 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 ZDHHC12Q96GR4 267 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 SEC22CQ9BRL7 303 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 DOHHQ9BU89 302 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 OSBPL11Q9BXB4 747 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 ZNF700Q9H0M5 742 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 MARCH7Q9H992 704 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 UCK1Q9HA47 277 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 PDE7BQ9NP56 450 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 IL1RAPQ9NPH3 570 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 ZFP57Q9NU63 452 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 MS4A12Q9NXJ0 267 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 TMEM9Q9P0T7 183 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 SPATA2Q9UM82 520 aa7.23□□□□□ -1.25
SOX6-211ENST00000528429 CHTOPQ9Y3Y2 248 aaKnown RBP7.23□□□□□ -1.25
SOX6-211ENST00000528429 ARID1BQ8NFD5 2236 aaPredicted RBP7.22□□□□□ -1.25
SOX6-211ENST00000528429 IGHV1OR21-1A0A087WYE8 117 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 TRAV20A0A0B4J274 112 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 PATE3B3GLJ2 98 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 HRO43593 1189 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 FGF17O60258 216 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 MED26O95402 600 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 SNAP29O95721 258 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 FHP07954 510 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 GNAO1P09471 354 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 HOXA6P31267 233 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 TAGLN2P37802 199 aaKnown RBP7.22□□□□□ -1.25
SOX6-211ENST00000528429 ARSFP54793 590 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 PRR5P85299 388 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 KCNAB2Q13303 367 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 MLC1Q15049 377 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 SHBQ15464 509 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 SYPL1Q16563 259 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 ANKRD34AQ69YU3 496 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 OR2T5Q6IEZ7 315 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 KRT80Q6KB66 452 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 BHLHB9Q6PI77 547 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 KRT74Q7RTS7 529 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 SPRED1Q7Z699 444 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 TMEM179BQ7Z7N9 219 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 SIMC1Q8NDZ2 872 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 NUP43Q8NFH3 380 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 OR2T29Q8NH02 315 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 ADAMTS16Q8TE57 1224 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 EFHD2Q96C19 240 aaPredicted RBP7.22□□□□□ -1.25
SOX6-211ENST00000528429 C10orf90Q96M02 699 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 ZNF681Q96N22 645 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 PRMT8Q9NR22 394 aaPredicted RBP7.22□□□□□ -1.25
SOX6-211ENST00000528429 POLE3Q9NRF9 147 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 VNN3Q9NY84 501 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 RP1P56715 2156 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 OR2W5A6NFC9 320 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 CHST10O43529 356 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 NUDT21O43809 227 aaKnown RBP7.22□□□□□ -1.25
SOX6-211ENST00000528429 DUX1O43812 170 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 OR6B1O95007 311 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 PGM3O95394 542 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 CLPTM1O96005 669 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 GIMD1P0DJR0 217 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 GLB1P16278 677 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 NT5EP21589 574 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 NOS3P29474 1203 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 PPP2R1BP30154 601 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 DCTP40126 519 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 KHKP50053 298 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 SELENOWP63302 87 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 KCNJ10P78508 379 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 DAG1Q14118 895 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 NPTX1Q15818 432 aa7.22□□□□□ -1.25
SOX6-211ENST00000528429 SYT16Q17RD7 645 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms