RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 LMF2Q9BU23 707 aaKnown RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 RUBCNLQ9H714 662 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 C3orf14Q9HBI5 128 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 Q9N2J8 555 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 KLRF1Q9NZS2 232 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 HAO1Q9UJM8 370 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 MRTO4Q9UKD2 239 aaKnown RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 RAP2CQ9Y3L5 183 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 OR10H1Q9Y4A9 318 aa11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 NUP214P35658 2090 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-209ENST00000528230 UTP20O75691 2785 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 AHRRA9YTQ3 701 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 HNRNPRO43390 633 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 NME6O75414 186 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 SKAP2O75563 359 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 TRAPPC6AO75865 159 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 GPC1P35052 558 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 HPCAL1P37235 193 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 SLC1A6P48664 564 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 RPL14P50914 215 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 EMX2Q04743 252 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 ZNF155Q12901 538 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 GAB1Q13480 694 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 DECR1Q16698 335 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 ZNF385BQ569K4 471 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 NHSL2Q5HYW2 709 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 IL23RQ5VWK5 629 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 ZNF787Q6DD87 383 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 ANKRD26P1Q6NSI1 321 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 ZNF585AQ6P3V2 769 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 ZCCHC12Q6PEW1 402 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 NCCRP1Q6ZVX7 275 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 LRRC34Q8IZ02 419 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 FNDC5Q8NAU1 212 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 OR4N2Q8NGD1 307 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 OR5M9Q8NGP3 310 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 CLHC1Q8NHS4 586 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 CA5BP1Q8WTZ4 195 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 CIDECQ96AQ7 238 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 SDCCAG3Q96C92 435 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 TUBGCP3Q96CW5 907 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 COQ8BQ96D53 544 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 PRPF18Q99633 342 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 TTYH2Q9BSA4 534 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 SLC6A15Q9H2J7 730 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 SPRR3Q9UBC9 169 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 CBLCQ9ULV8 474 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 MAPRE3Q9UPY8 281 aa11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 EIF3LQ9Y262 564 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 MRPS18CQ9Y3D5 142 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-209ENST00000528230 FAM47E-STBD1D6RA91 191 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 GNB5O14775 395 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 SCAMP2O15127 329 aaKnown RBP11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 EMC8O43402 210 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 PRPS1L1P21108 318 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 CHRNB4P30926 498 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 MAP3K8P41279 467 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 TRPC1P48995 793 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 HCFC1P51610 2035 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 PSMD4P55036 377 aaKnown RBP11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 C21orf58P58505 322 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 CRYZQ08257 329 aaKnown RBP11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 PMPCAQ10713 525 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 HSPB3Q12988 150 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 STX3Q13277 289 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 SF3B4Q15427 424 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 VPS26BQ4G0F5 336 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 HHATQ5VTY9 493 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 VASNQ6EMK4 673 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 RTL6Q6ICC9 239 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 B3GNT6Q6ZMB0 384 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 PLCZ1Q86YW0 608 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 PM20D2Q8IYS1 436 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 ZNF781Q8N8C0 355 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 CDRT4Q8N9R6 151 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 WDSUB1Q8N9V3 476 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 LILRB4Q8NHJ6 448 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 SORT1Q99523 831 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 TIMP4Q99727 224 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 C20orf27Q9GZN8 174 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 ZNF395Q9H8N7 513 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 GALNT9Q9HCQ5 603 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 ATAD3AQ9NVI7 634 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 ASIC5Q9NY37 505 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 GIMAP2Q9UG22 337 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 ABCG2Q9UNQ0 655 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 RNF6Q9Y252 685 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 FAM215AQ9Y5M1 114 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 WIF1Q9Y5W5 379 aa11.05□□□□□ -0.64
TRAPPC4-209ENST00000528230 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.04□□□□□ -0.64
TRAPPC4-209ENST00000528230 C15orf38-AP3S2A0A0A6YYH1 394 aa11.04□□□□□ -0.64
TRAPPC4-209ENST00000528230 A0A1W2PRB8 838 aa11.04□□□□□ -0.64
TRAPPC4-209ENST00000528230 C2orf72A6NCS6 295 aa11.04□□□□□ -0.64
TRAPPC4-209ENST00000528230 SOX30O94993 753 aa11.04□□□□□ -0.64
TRAPPC4-209ENST00000528230 NKX2-2O95096 273 aa11.04□□□□□ -0.64
TRAPPC4-209ENST00000528230 IL33O95760 270 aa11.04□□□□□ -0.64
TRAPPC4-209ENST00000528230 ACTL6AO96019 429 aa11.04□□□□□ -0.64
TRAPPC4-209ENST00000528230 GLI4P10075 376 aa11.04□□□□□ -0.64
TRAPPC4-209ENST00000528230 CYP4B1P13584 511 aa11.04□□□□□ -0.64
TRAPPC4-209ENST00000528230 BGNP21810 368 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms