RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 HBEGFQ99075 208 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 TIMP4Q99727 224 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 BRINP2Q9C0B6 783 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 NXF5Q9H1B4 397 aaKnown RBP9.58□□□□□ -0.88
CPSF1-203ENST00000527916 UBQLN3Q9H347 655 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 CALHM2Q9HA72 323 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 UBTD1Q9HAC8 227 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 TAS2R7Q9NYW3 318 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 HEY2Q9UBP5 337 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 BCAP29Q9UHQ4 241 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 UTS2RQ9UKP6 389 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 CAMK2AQ9UQM7 478 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 DLGAP4Q9Y2H0 992 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 WBP11Q9Y2W2 641 aaKnown RBP9.58□□□□□ -0.88
CPSF1-203ENST00000527916 ANK2Q01484 3957 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 MBD3L4A6NDZ8 208 aaPredicted RBP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 MBD3L3A6NE82 208 aaPredicted RBP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 MBD3L5A6NJ08 208 aaPredicted RBP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 UBFD1O14562 309 aaKnown RBP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 TRAPPC6AO75865 159 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 PROCP04070 461 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 HPNP05981 417 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 TMIGD3P0DMS9 266 aaPredicted RBP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 TIA1P31483 386 aaKnown RBP eCLIP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 MPIP34949 423 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 ALDH9A1P49189 494 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 CDK9P50750 372 aaKnown RBP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 NAGLUP54802 743 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 DUSP2Q05923 314 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 CRYZQ08257 329 aaKnown RBP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 RCAN2Q14206 197 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 ZNF628Q5EBL2 1059 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 NHSL2Q5HYW2 709 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 FNDC7Q5VTL7 733 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 SLC30A6Q6NXT4 461 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 TMEM64Q6YI46 380 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 FRMD7Q6ZUT3 714 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 CCDC116Q8IYX3 515 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 OR52R1Q8NGF1 315 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 MBD3L2Q8NHZ7 208 aaPredicted RBP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 FAM76AQ8TAV0 307 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 C16orf78Q8WTQ4 265 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 RILPQ96NA2 401 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 SFXN3Q9BWM7 321 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 GSX2Q9BZM3 304 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 PRDM14Q9GZV8 571 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 STMN4Q9H169 189 aaPredicted RBP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 MID1IP1Q9NPA3 183 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 SLC35C2Q9NQQ7 365 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 GALNT8Q9NY28 637 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 ZNF226Q9NYT6 803 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 DTX4Q9Y2E6 619 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 GPR55Q9Y2T6 319 aaPredicted RBP9.57□□□□□ -0.88
CPSF1-203ENST00000527916 PLLPQ9Y342 182 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 TIMM22Q9Y584 194 aa9.57□□□□□ -0.88
CPSF1-203ENST00000527916 GNG14A0A1W2PPG7 69 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 FRG2CA6NGY1 282 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 OR6C70A6NIJ9 312 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 KDM4EB2RXH2 506 aaPredicted RBP9.56□□□□□ -0.88
CPSF1-203ENST00000527916 NPIPB8E9PQR5 432 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 PLOD3O60568 738 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 PLIN3O60664 434 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 ABCB7O75027 752 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 SLITRK5O94991 958 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 F12P00748 615 aaPredicted RBP9.56□□□□□ -0.88
CPSF1-203ENST00000527916 SHBGP04278 402 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 IL3P08700 152 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 ANXA4P09525 319 aaPredicted RBP9.56□□□□□ -0.88
CPSF1-203ENST00000527916 CPA3P15088 417 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 PCSK2P16519 638 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 HTR6P50406 440 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 DIO3P55073 304 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 HMGCS1Q01581 520 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 SLC18A2Q05940 514 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 DMTNQ08495 405 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 EXOSC7Q15024 291 aaKnown RBP9.56□□□□□ -0.88
CPSF1-203ENST00000527916 TIGD3Q6B0B8 471 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 HEPHL1Q6MZM0 1159 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 RNF165Q6ZSG1 346 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 LUZP2Q86TE4 346 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 CCNYL1Q8N7R7 359 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 ADCY4Q8NFM4 1077 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 UBLCP1Q8WVY7 318 aaPredicted RBP9.56□□□□□ -0.88
CPSF1-203ENST00000527916 HGDQ93099 445 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 OMA1Q96E52 524 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 ZFP3Q96NJ6 502 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 GNRHR2Q96P88 292 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 BTBD9Q96Q07 612 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 ITPAQ9BY32 194 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 ACBD3Q9H3P7 528 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 PIGMQ9H3S5 423 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 OXSMQ9NWU1 459 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 C15orf41Q9Y2V0 281 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 CUBNO60494 3623 aa9.56□□□□□ -0.88
CPSF1-203ENST00000527916 ANK3Q12955 4377 aaKnown RBP9.56□□□□□ -0.88
CPSF1-203ENST00000527916 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.55□□□□□ -0.885e-8■■■■□ 22.3
CPSF1-203ENST00000527916 CTIFO43310 598 aaKnown RBP9.55□□□□□ -0.88
CPSF1-203ENST00000527916 ICOSLGO75144 302 aa9.55□□□□□ -0.88
CPSF1-203ENST00000527916 CBR3O75828 277 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms