RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 TREM1Q9NP99 234 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 RIMS3Q9UJD0 308 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 RETP07949 1114 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 ZNF182P17025 639 aaPredicted RBP13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 MC3RP41968 323 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 CDKN2CP42773 168 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 TRA2BP62995 288 aaKnown RBP13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 CTBSQ01459 385 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 TGFBR3Q03167 851 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 VEZF1Q14119 521 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 BCL2L15Q5TBC7 163 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 VTCN1Q7Z7D3 282 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 TSPYL5Q86VY4 417 aaPredicted RBP13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 NLGN4YQ8NFZ3 816 aaPredicted RBP13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 LRRC20Q8TCA0 184 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 SPTSSAQ969W0 71 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 TRIM43Q96BQ3 446 aaPredicted RBP13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 ARL5BQ96KC2 179 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 ZNF350Q9GZX5 532 aa13.71□□□□□ -0.21
NCAPD3-203ENST00000525964 PRSS38A1L453 326 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 ZNF850A8MQ14 1090 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 RNASET2O00584 256 aaKnown RBP13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 CASC3O15234 703 aaKnown RBP13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 STSP08842 583 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 LCN1P31025 176 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 YPEL5P62699 121 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 GK3PQ14409 553 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 ZNF789Q5FWF6 425 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 PPP1R3BQ86XI6 285 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 MDGA1Q8NFP4 955 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 RLN3Q8WXF3 142 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 HHIPL1Q96JK4 782 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 MYH11P35749 1972 aa13.71□□□□□ -0.22
NCAPD3-203ENST00000525964 A0A1W2PPK0 400 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 OSMP13725 252 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 RAB41Q5JT25 222 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 XKR5Q6UX68 686 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 GALNT6Q8NCL4 622 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 MEPEQ9NQ76 525 aaPredicted RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 HEBP1Q9NRV9 189 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 SLC35A3Q9Y2D2 325 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 PCDHA9Q9Y5H5 950 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 BLACEA4D250 179 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 SFTPDP35247 375 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 EIF2S3P41091 472 aaKnown RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 TAP2Q03519 686 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 PLBD1Q6P4A8 553 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 MFSD6LQ8IWD5 586 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 NAGSQ8N159 534 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 ZNF619Q8N2I2 560 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 ZNF431Q8TF32 576 aaPredicted RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 PTERQ96BW5 349 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 POT1Q9NUX5 634 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 FAM118AQ9NWS6 357 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 LRIT1Q9P2V4 623 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 GJD2Q9UKL4 321 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 MAGED1Q9Y5V3 778 aaPredicted RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 LOC285095A0A1B0GVY8 99 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 GRXCR2A6NFK2 248 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 G3V2L1 256 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 SMAD9O15198 467 aaKnown RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 ACTL6BO94805 426 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 ATG12O94817 140 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 GRPRP30550 384 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 PRKXP51817 358 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 ZNF140P52738 457 aaPredicted RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 RSU1Q15404 277 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 SLC25A44Q96H78 314 aaPredicted RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 SLC6A7Q99884 636 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 RNF38Q9H0F5 515 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 ACOT13Q9NPJ3 140 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 ADAM18Q9Y3Q7 739 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 RGS9O75916 674 aaPredicted RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 IGHEP01854 428 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 RPS17P08708 135 aaKnown RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 NADSYN1Q6IA69 706 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 TMEM173Q86WV6 379 aaPredicted RBP13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 OR9A2Q8NGT5 310 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 MAL2Q969L2 176 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 NXPE3Q969Y0 559 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 NTMT1Q9BV86 223 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 HDHD5Q9BXW7 423 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 SYT4Q9H2B2 425 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 SPEF1Q9Y4P9 236 aa13.7□□□□□ -0.22
NCAPD3-203ENST00000525964 EFCAB7A8K855 629 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 TMEM225BP0DP42 221 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 HLCSP50747 726 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 DAP3P51398 398 aaKnown RBP13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 CTSCP53634 463 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 APOFQ13790 326 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 CDNFQ49AH0 187 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 TLDC1Q6P9B6 456 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 ZNF765Q7L2R6 523 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 GALNT11Q8NCW6 608 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 PINK1Q9BXM7 581 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 BEX2Q9BXY8 128 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 ACTR6Q9GZN1 396 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 BEX1Q9HBH7 125 aa13.69□□□□□ -0.22
NCAPD3-203ENST00000525964 KCNN3Q9UGI6 736 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms