RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 DHRS4L1P0CG22 281 aa13.02□□□□□ -0.32
LRRK1-202ENST00000525284 AKAIN1P0CW23 69 aa13.02□□□□□ -0.32
LRRK1-202ENST00000525284 CBSLP0DN79 551 aa13.02□□□□□ -0.32
LRRK1-202ENST00000525284 ETFAP13804 333 aa13.02□□□□□ -0.32
LRRK1-202ENST00000525284 ZNF43P17038 809 aa13.02□□□□□ -0.32
LRRK1-202ENST00000525284 CBSP35520 551 aa13.02□□□□□ -0.32
LRRK1-202ENST00000525284 DUSP7Q16829 419 aa13.02□□□□□ -0.32
LRRK1-202ENST00000525284 TRIM61Q5EBN2 209 aa13.02□□□□□ -0.32
LRRK1-202ENST00000525284 NDNFQ8TB73 568 aa13.02□□□□□ -0.32
LRRK1-202ENST00000525284 TRMT2BQ96GJ1 504 aaKnown RBP13.02□□□□□ -0.32
LRRK1-202ENST00000525284 PTCHD1Q96NR3 888 aa13.02□□□□□ -0.32
LRRK1-202ENST00000525284 USP36Q9P275 1121 aaKnown RBP13.02□□□□□ -0.32
LRRK1-202ENST00000525284 FAM171A2A8MVW0 826 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 SPATA31C2B4DYI2 1134 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 RNF225M0QZC1 329 aaPredicted RBP13.02□□□□□ -0.33
LRRK1-202ENST00000525284 SQSTM1Q13501 440 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 VAMP3Q15836 100 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 CNIH2Q6PI25 160 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 KRTCAP2Q8N6L1 136 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 FOXRED1Q96CU9 486 aaPredicted RBP13.02□□□□□ -0.33
LRRK1-202ENST00000525284 FAM46AQ96IP4 442 aaKnown RBP13.02□□□□□ -0.33
LRRK1-202ENST00000525284 AK6Q9Y3D8 172 aaKnown RBP13.02□□□□□ -0.33
LRRK1-202ENST00000525284 CNTNAP4Q9C0A0 1308 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 PMM2O15305 246 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 EBLN1P0CF75 366 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 GALNT1Q10472 559 aaPredicted RBP13.02□□□□□ -0.33
LRRK1-202ENST00000525284 ECM1Q16610 540 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 PPP1R3AQ16821 1122 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 CATSPERGQ6ZRH7 1159 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 GDPD1Q8N9F7 314 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 OR8J1Q8NGP2 316 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 REEP6Q96HR9 211 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 GPN2Q9H9Y4 310 aaPredicted RBP13.02□□□□□ -0.33
LRRK1-202ENST00000525284 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 PRODH2Q9UF12 536 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 A6NCN8 305 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 KIAA0355O15063 1070 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 UPP1Q16831 310 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 AAK1Q2M2I8 961 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 TMEM107Q6UX40 140 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 CD163Q86VB7 1156 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 HORMAD2Q8N7B1 307 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 IL31RAQ8NI17 732 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 DCAF16Q9NXF7 216 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 DNAJB11Q9UBS4 358 aa13.02□□□□□ -0.33
LRRK1-202ENST00000525284 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 MT-ND4P03905 459 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 RPS24P62847 133 aaKnown RBP13.01□□□□□ -0.33
LRRK1-202ENST00000525284 PDZD11Q5EBL8 140 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 CPNE8Q86YQ8 564 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 KIAA1143Q96AT1 154 aaPredicted RBP13.01□□□□□ -0.33
LRRK1-202ENST00000525284 ZBTB8AQ96BR9 441 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 FCRL5Q96RD9 977 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 GJD2Q9UKL4 321 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 RFXAPO00287 272 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 CNTN5O94779 1100 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 OR10J4P0C629 311 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
LRRK1-202ENST00000525284 GHRHRQ02643 423 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 ADGRF3Q8IZF5 1079 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 OR52P1PQ8NH57 321 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 NICN1Q9BSH3 213 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 B4GALT7Q9UBV7 327 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 D6RAR5 112 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 PHYHO14832 338 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 KDELR3O43731 214 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 OR2T1O43869 369 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 SEC14L2O76054 403 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 HOXA9P31269 272 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 SGSHP51688 502 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 RFTN1Q14699 578 aaPredicted RBP13.01□□□□□ -0.33
LRRK1-202ENST00000525284 SF3A2Q15428 464 aaKnown RBP13.01□□□□□ -0.33
LRRK1-202ENST00000525284 DENND1AQ8TEH3 1009 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 SGK3Q96BR1 496 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 CD244Q9BZW8 370 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 CDH20Q9HBT6 801 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 KLHL33A6NCF5 533 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 WNT10BO00744 389 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 TOR1AO14656 332 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 LCATP04180 440 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 RAB7AP51149 207 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 AVPI1Q5T686 147 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 GKN2Q86XP6 184 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 CHCHD4Q8N4Q1 142 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 CLDN19Q8N6F1 224 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 SLC30A7Q8NEW0 376 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 OR52H1Q8NGJ2 320 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 SYNPRQ8TBG9 265 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 TSGA13Q96PP4 275 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 NSUN3Q9H649 340 aaKnown RBP13.01□□□□□ -0.33
LRRK1-202ENST00000525284 TERTO14746 1132 aaKnown RBP13.01□□□□□ -0.33
LRRK1-202ENST00000525284 CYB5BO43169 146 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 CSF1P09603 554 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 LMO2P25791 158 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 RAB28P51157 221 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 DAOAP59103 153 aa13.01□□□□□ -0.33
LRRK1-202ENST00000525284 COL9A3Q14050 684 aaPredicted RBP13.01□□□□□ -0.33
LRRK1-202ENST00000525284 SULF2Q8IWU5 870 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms