RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 BCKDHAP12694 445 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 SDC1P18827 310 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 GRK2P25098 689 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ELAVL4P26378 380 aaKnown RBP9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 GDF1P27539 372 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 COL8A1P27658 744 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ARRB2P32121 409 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 KRT20P35900 424 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 RPL3P39023 403 aaKnown RBP9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 DCTP40126 519 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 FRKP42685 505 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 MASP1P48740 699 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 PDE7AQ13946 482 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 NNATQ16517 81 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ZNF630Q2M218 657 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 SMU1Q2TAY7 513 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 GALNTL6Q49A17 601 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 CYP27C1Q4G0S4 372 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ATP6AP1LQ52LC2 224 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 XKR7Q5GH72 579 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 C6orf136Q5SQH8 315 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 WLSQ5T9L3 541 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 FNDC7Q5VTL7 733 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 BICRALQ6AI39 1079 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 HIST2H2BCQ6DN03 193 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ACAD11Q709F0 780 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 SLC44A2Q8IWA5 706 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 OR2L13Q8N349 312 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 NATD1Q8N6N6 113 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 OR1J4Q8NGS1 313 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 CEP70Q8NHQ1 597 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ZFP28Q8NHY6 868 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 NEIL3Q8TAT5 605 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ASB5Q8WWX0 329 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 TMBIM1Q969X1 311 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 PPCDCQ96CD2 204 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 DTNBP1Q96EV8 351 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ZBED6CLQ96FA7 236 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 TSSK3Q96PN8 268 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 NODALQ96S42 347 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 UBQLN3Q9H347 655 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 RUBCNLQ9H714 662 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 EXO5Q9H790 373 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ANKRA2Q9H9E1 313 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 KCNK9Q9NPC2 374 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ACSS1Q9NUB1 689 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 COQ3Q9NZJ6 369 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 SH3BP4Q9P0V3 963 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 BAIAP2L1Q9UHR4 511 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 ACAD8Q9UKU7 415 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 LIPGQ9Y5X9 500 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 CELSR2Q9HCU4 2923 aa9.52□□□□□ -0.89
TRAPPC9-209ENST00000521167 WDR91A4D1P6 747 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 PRAMEF25A6NGN4 478 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 UPK1AO00322 258 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 PDPK1O15530 556 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 AKAP10O43572 662 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 ICOSLGO75144 302 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 PEX11AO75192 247 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 CBR3O75828 277 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 TRAPPC6AO75865 159 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 PSMG1O95456 288 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 HSPA4LO95757 839 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 GABRA1P14867 456 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 ACVR2AP27037 513 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 HTR1EP28566 365 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 PTGER4P35408 488 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 PTGDSP41222 190 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 MC3RP41968 323 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 CDK9P50750 372 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 MANFP55145 182 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 CORO7P57737 925 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 ABCE1P61221 599 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 CBX1P83916 185 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 MAD2L1Q13257 205 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 ZNHIT3Q15649 155 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 CHI3L2Q15782 390 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 TMEM107Q6UX40 140 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 NPSR1Q6W5P4 371 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 C3P1Q6ZMU1 363 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 LARP4Q71RC2 724 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 LIX1Q8N485 282 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 AGR3Q8TD06 166 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 RND1Q92730 232 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 GFM2Q969S9 779 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 PKNOX2Q96KN3 472 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 GNRHR2Q96P88 292 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 LMF2Q9BU23 707 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 OSBPL11Q9BXB4 747 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 VIPAS39Q9H9C1 493 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 C3orf14Q9HBI5 128 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 PNPLA3Q9NST1 481 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 DDX18Q9NVP1 670 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 PGPEP1Q9NXJ5 209 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 KLRF1Q9NZS2 232 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 NTMQ9P121 344 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 ATP6V1HQ9UI12 483 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 MRTO4Q9UKD2 239 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 PRDM4Q9UKN5 801 aa9.51□□□□□ -0.89
TRAPPC9-209ENST00000521167 MAPRE3Q9UPY8 281 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms