RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 TRIM63Q969Q1 353 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 NEIL2Q969S2 332 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MS4A6EQ96DS6 147 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MISP3Q96FF7 219 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 SENP5Q96HI0 755 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MS4A14Q96JA4 679 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 DGAT2Q96PD7 388 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 GAL3ST4Q96RP7 486 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 FAM118BQ9BPY3 351 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 KIFC1Q9BW19 673 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 TRIM54Q9BYV2 358 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 FRMD8P1Q9BZ68 369 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 KLHL4Q9C0H6 718 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 OR2B2Q9GZK3 357 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 REXO4Q9GZR2 422 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 WWTR1Q9GZV5 400 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 C12orf65Q9H3J6 166 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 KLHL31Q9H511 634 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF696Q9H7X3 374 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 LIN7BQ9HAP6 207 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 EIF2B3Q9NR50 452 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 DNAJC11Q9NVH1 559 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MKS1Q9NXB0 559 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MS4A12Q9NXJ0 267 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ARL15Q9NXU5 204 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 WWOXQ9NZC7 414 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 WHRNQ9P202 907 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 GALPQ9UBC7 116 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 PROCRQ9UNN8 238 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 PDE10AQ9Y233 779 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 UTP11Q9Y3A2 253 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MRPS18CQ9Y3D5 142 aaKnown RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 RNF115Q9Y4L5 304 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 MAGED1Q9Y5V3 778 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-207ENST00000520168 ACTL7BQ9Y614 415 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 NOTCH1P46531 2555 aa4.4□□□□□ -1.71
SDCBP-207ENST00000520168 IGHV4-30-2A0A087WSY4 118 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 C2orf92A0A1B0GVN3 265 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 FAM234BA2RU67 622 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ANKDD1BA6NHY2 528 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 C4orf51C9J302 202 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 GOLGA8TH3BQL2 631 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 BOLA2-SMG1P6H3BVE0 249 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 SSX4O60224 188 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 LDB3O75112 727 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 H2AFYO75367 372 aaKnown RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 CLEC3AO75596 197 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 STAMBPO95630 424 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 SCGB1D2O95969 90 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 CGAP01215 116 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 THBDP07204 575 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 APRTP07741 180 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 CREB1P16220 341 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 NAGAP17050 411 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ITGA2P17301 1181 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 KRT15P19012 456 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 GNAZP19086 355 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 RAB6AP20340 208 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 USF1P22415 310 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ARNTP27540 789 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 NMBRP28336 390 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 GALNSP34059 522 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 CASP3P42574 277 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 KIR2DL2P43627 348 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 KCNC1P48547 511 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 LHX2P50458 406 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 CLDN18P56856 261 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 BPIFB3P59826 476 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 GUCY2DQ02846 1103 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 SRYQ05066 204 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 GPS1Q13098 491 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 DHX34Q14147 1143 aaKnown RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 EBPQ15125 230 aaKnown RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 RBBP5Q15291 538 aaKnown RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 GFOD2Q3B7J2 385 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF672Q499Z4 452 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 AGAP6Q5VW22 663 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 HLA-DQA1Q5Y7H0 255 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 NEPROQ6NW34 567 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ABHD17CQ6PCB6 329 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ANGPTL8Q6UXH0 198 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 TMIGD1Q6UXZ0 262 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 USP51Q70EK9 711 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 FAM214BQ7L5A3 538 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 PIWIL4Q7Z3Z4 852 aaKnown RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 TMPRSS11BQ86T26 416 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ATG4DQ86TL0 474 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 YRDCQ86U90 279 aaKnown RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 DTX2Q86UW9 622 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 STK32CQ86UX6 486 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 EXOC3L1Q86VI1 746 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 CPNE9Q8IYJ1 553 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 ST13P4Q8IZP2 240 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-207ENST00000520168 KRT78Q8N1N4 520 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 MREGQ8N565 214 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 LRRC17Q8N6Y2 441 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 BBOF1Q8ND07 529 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 OR8H1Q8NGG4 311 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 OR6K3Q8NGY3 331 aa4.39□□□□□ -1.71
SDCBP-207ENST00000520168 SLC35B2Q8TB61 432 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms