RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 DUSP8Q13202 625 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 PTGES3Q15185 160 aaKnown RBP17.21■□□□□ 0.35
FAM49B-214ENST00000519540 PRPF38BQ5VTL8 546 aaKnown RBP17.21■□□□□ 0.35
FAM49B-214ENST00000519540 GALNT12Q8IXK2 581 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 METTL27Q8N6F8 245 aaPredicted RBP17.21■□□□□ 0.35
FAM49B-214ENST00000519540 OR52R1Q8NGF1 315 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 FAM81AQ8TBF8 368 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 GPR151Q8TDV0 419 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 HOXB13Q92826 284 aaPredicted RBP17.21■□□□□ 0.35
FAM49B-214ENST00000519540 RBM18Q96H35 190 aaKnown RBP17.21■□□□□ 0.35
FAM49B-214ENST00000519540 PRR14Q9BWN1 585 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 UCK2Q9BZX2 261 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 SAP130Q9H0E3 1048 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 VCX3AQ9NNX9 186 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 PRMT8Q9NR22 394 aaPredicted RBP17.21■□□□□ 0.35
FAM49B-214ENST00000519540 ENAMQ9NRM1 1142 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 KLHL28Q9NXS3 571 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 SCN3BQ9NY72 215 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 REV1Q9UBZ9 1251 aa17.21■□□□□ 0.35
FAM49B-214ENST00000519540 ZNF443Q9Y2A4 671 aaPredicted RBP17.21■□□□□ 0.35
FAM49B-214ENST00000519540 AGAP5A6NIR3 686 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 FRS3O43559 492 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 STX11O75558 287 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 CSF2RBP32927 897 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 CRISP1P54107 249 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 SLC35A2P78381 396 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 PGBD2Q6P3X8 592 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 COX18Q8N8Q8 333 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 OR51Q1Q8NH59 317 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 RHOXF1Q8NHV9 184 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 RIT1Q92963 219 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 DGCR6LQ9BY27 220 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 CTPS2Q9NRF8 586 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 SEMA5BQ9P283 1151 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 FTSJ1Q9UET6 329 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 OR2W5A6NFC9 320 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 COQ9O75208 318 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 OR2B3O76000 313 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 CHMP24386 653 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 GABRA3P34903 492 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 KRT20P35900 424 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 ARL4DP49703 201 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 LARS2Q15031 903 aaKnown RBP17.2■□□□□ 0.34
FAM49B-214ENST00000519540 GPR68Q15743 365 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 SNAP47Q5SQN1 464 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 B3GNT6Q6ZMB0 384 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 CLVS1Q8IUQ0 354 aaPredicted RBP17.2■□□□□ 0.34
FAM49B-214ENST00000519540 NLGN4XQ8N0W4 816 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 ZNF619Q8N2I2 560 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 NR4A3Q92570 626 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 FBXO34Q9NWN3 711 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 PILRBQ9UKJ0 227 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 SNX5Q9Y5X3 404 aa17.2■□□□□ 0.34
FAM49B-214ENST00000519540 MN1Q10571 1320 aaPredicted RBP17.19■□□□□ 0.34
FAM49B-214ENST00000519540 ZAR1LA6NP61 321 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 TMEM150CB9EJG8 249 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 NKX2-2O95096 273 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 AK1P00568 194 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 THBS1P07996 1170 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 OSMP13725 252 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 IDH2P48735 452 aaKnown RBP17.19■□□□□ 0.34
FAM49B-214ENST00000519540 HSD17B7P56937 341 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 CSNK2BP67870 215 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 KANSL1Q7Z3B3 1105 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 D2HGDHQ8N465 521 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 LINC00471Q8N535 108 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 MORN4Q8NDC4 146 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 CACYBPQ9HB71 228 aaKnown RBP17.19■□□□□ 0.34
FAM49B-214ENST00000519540 CUTCQ9NTM9 273 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 ZNF226Q9NYT6 803 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 NLGN3Q9NZ94 848 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 PTTG2Q9NZH5 202 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 ERVK-18Q9QC07 812 aa17.19■□□□□ 0.34
FAM49B-214ENST00000519540 ARID1BQ8NFD5 2236 aaPredicted RBP17.18■□□□□ 0.34
FAM49B-214ENST00000519540 CABIN1Q9Y6J0 2220 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 CENPVL1A0A0U1RR11 272 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 CLDN24A6NM45 220 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 MAOAP21397 527 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 RPS4Y1P22090 263 aaKnown RBP17.18■□□□□ 0.34
FAM49B-214ENST00000519540 SLC5A2P31639 672 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 UGT2B15P54855 530 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 TAS2R41P59536 307 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 EEF1A1P68104 462 aaKnown RBP17.18■□□□□ 0.34
FAM49B-214ENST00000519540 POU6F2P78424 691 aaPredicted RBP17.18■□□□□ 0.34
FAM49B-214ENST00000519540 TARDBPQ13148 414 aaKnown RBP eCLIP17.18■□□□□ 0.342e-7■■■■□ 25.7
FAM49B-214ENST00000519540 MAPK14Q16539 360 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 WDR74Q6RFH5 385 aaPredicted RBP17.18■□□□□ 0.34
FAM49B-214ENST00000519540 ZNF836Q6ZNA1 936 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 DEPDC4Q8N2C3 294 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 ZNF540Q8NDQ6 660 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 OR4K5Q8NGD3 323 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 OR13F1Q8NGS4 319 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 GAB3Q8WWW8 586 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 CNDP2Q96KP4 475 aaKnown RBP17.18■□□□□ 0.34
FAM49B-214ENST00000519540 TNRC6BQ9UPQ9 1833 aaKnown RBP17.18■□□□□ 0.34
FAM49B-214ENST00000519540 CACNA1EQ15878 2313 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 GXYLT2A0PJZ3 443 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 FAM20BO75063 409 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 CYP7B1O75881 506 aa17.18■□□□□ 0.34
FAM49B-214ENST00000519540 SOX30O94993 753 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms