RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 GTF3AQ92664 365 aaKnown RBP2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 C11orf24Q96F05 449 aaPredicted RBP2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 ATXN7L3BQ96GX2 97 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 PRICKLE1Q96MT3 831 aaPredicted RBP2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 AGAP4Q96P64 663 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 TNFRSF13CQ96RJ3 184 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 SYT15Q9BQS2 421 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 DGCR6LQ9BY27 220 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 TRIM9Q9C026 710 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 COMMD4Q9H0A8 199 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 MEAF6Q9HAF1 191 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 PALMDQ9NP74 551 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 DUS2Q9NX74 493 aaKnown RBP2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 RAI14Q9P0K7 980 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 EIF3KQ9UBQ5 218 aaKnown RBP2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 GAB2Q9UQC2 676 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 SLC9A8Q9Y2E8 581 aa2.74□□□□□ -1.97
RNU6-840P-201ENST00000517275 IGLV4-3A0A075B6K6 122 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 IGHV3OR16-12A0A075B7B8 117 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 CCDC169A6NNP5 214 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 FOXI3A8MTJ6 420 aaPredicted RBP2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ZNF749O43361 778 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 CALCAP01258 141 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 IGHV3-9P01782 118 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 IGHG3P01860 377 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 OR9G9P0C7N8 305 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 CD1DP15813 335 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 PGCP20142 388 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ATP6V1C1P21283 382 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 UGT1A4P22310 534 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 DLSTP36957 453 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ID1P41134 155 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 HAND2P61296 217 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 OSTNP61366 133 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 NOP14P78316 857 aaKnown RBP2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 HNRNPA0Q13151 305 aaKnown RBP2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ATXN7L3Q14CW9 347 aaPredicted RBP2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 PCK2Q16822 640 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 EXOC3L2Q2M3D2 409 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 FAM71F2Q6NXP2 309 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ZNF613Q6PF04 617 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ADAMTSL5Q6ZMM2 481 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 STAC2Q6ZMT1 411 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ZNF841Q6ZN19 808 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 DPY19L4Q7Z388 723 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 TMEM17Q86X19 198 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 KLHDC8BQ8IXV7 354 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 CLDN19Q8N6F1 224 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 SAMD12Q8N8I0 201 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ZNF491Q8N8L2 437 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 EIF1ADQ8N9N8 165 aaKnown RBP2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 TRPV1Q8NER1 839 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 OR4F17Q8NGA8 305 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 NT5C3BQ969T7 300 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 MYLPFQ96A32 169 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 FBXO17Q96EF6 278 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 CNDP1Q96KN2 507 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 OR4F4Q96R69 305 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 CCT7Q99832 543 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 OPRPNQ99935 248 aaPredicted RBP2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ATF6BQ99941 703 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 TCHPQ9BT92 498 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 RPP25Q9BUL9 199 aaKnown RBP2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 GSDMCQ9BYG8 508 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 FGFBP2Q9BYJ0 223 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 DHX33Q9H6R0 707 aaKnown RBP2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 AMBNQ9NP70 447 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ZDHHC18Q9NUE0 388 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 RBM28Q9NW13 759 aaKnown RBP2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 SMOXQ9NWM0 555 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ZNF446Q9NWS9 450 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 MRPL39Q9NYK5 338 aaKnown RBP2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 SEC14L4Q9UDX3 406 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ANAPC7Q9UJX3 599 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ZNF580Q9UK33 172 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 SMC3Q9UQE7 1217 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 RASD1Q9Y272 281 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 TNFRSF18Q9Y5U5 241 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 ATP10DQ9P241 1426 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 FER1L5A0AVI2 2057 aa2.73□□□□□ -1.97
RNU6-840P-201ENST00000517275 GRIN2DO15399 1336 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 TRGV8A0A0C4DH27 118 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 MFSD2BA6NFX1 497 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 ZSCAN5CA6NGD5 496 aaPredicted RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 EPM2AB3EWF7 344 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 SOCS3O14543 225 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 OR1F1O43749 312 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 RANBP6O60518 1105 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 SURF6O75683 361 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 SORBS2O94875 1100 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 MBD3O95983 291 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 IGF1P05019 195 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 H2BFMP0C1H6 154 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 DBTP11182 482 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 ANXA3P12429 323 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 ZNF44P15621 663 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 TSPAN8P19075 237 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 LMO2P25791 158 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 CALML3P27482 149 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 SULT1E1P49888 294 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms