RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 GDF1P27539 372 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 GPC1P35052 558 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 PTGDSP41222 190 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 PSMD4P55036 377 aaKnown RBP11.69□□□□□ -0.54
CLCN3-210ENST00000515420 ADORA2A-AS1P86434 159 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 PTGR1Q14914 329 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 PDCD2Q16342 344 aaPredicted RBP11.69□□□□□ -0.54
CLCN3-210ENST00000515420 DECR1Q16698 335 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 EMC4Q5J8M3 183 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 ATG16L1Q676U5 607 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 TIGD3Q6B0B8 471 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 TMEM211Q6ICI0 200 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 ANKRD26P1Q6NSI1 321 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 ZCCHC12Q6PEW1 402 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 LARP4Q71RC2 724 aaKnown RBP eCLIP11.69□□□□□ -0.54
CLCN3-210ENST00000515420 MRGPRGQ86SM5 289 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 RIMKLAQ8IXN7 391 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 OR1J4Q8NGS1 313 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 PSMA8Q8TAA3 256 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 NEIL3Q8TAT5 605 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 COQ8BQ96D53 544 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 JSRP1Q96MG2 331 aaPredicted RBP11.69□□□□□ -0.54
CLCN3-210ENST00000515420 MS4A4EQ96PG1 132 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 NODALQ96S42 347 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 PAIP2Q9BPZ3 127 aaKnown RBP11.69□□□□□ -0.54
CLCN3-210ENST00000515420 C1orf50Q9BV19 199 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 MEAF6Q9HAF1 191 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 NEUROD4Q9HD90 331 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 THAP1Q9NVV9 213 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 KLRF1Q9NZS2 232 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 GIMAP2Q9UG22 337 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 CBLCQ9ULV8 474 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 ABCG2Q9UNQ0 655 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 LIPGQ9Y5X9 500 aa11.69□□□□□ -0.54
CLCN3-210ENST00000515420 CACNA1CQ13936 2221 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 A1L4Q6 167 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 NPIPA2E9PIF3 369 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 NPIPA3F8WFD2 350 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 KLF11O14901 512 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 EMC8O43402 210 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 WDR1O75083 606 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 CBR3O75828 277 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 SOX30O94993 753 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 PTPN6P29350 595 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 MAP3K8P41279 467 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 CDK9P50750 372 aaKnown RBP11.68□□□□□ -0.54
CLCN3-210ENST00000515420 CLDN8P56748 225 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 PRR5P85299 388 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 GXYLT1Q4G148 440 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 WLSQ5T9L3 541 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 CPTPQ5TA50 214 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 OGFOD2Q6N063 350 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 CDRT4Q8N9R6 151 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 OR7A2PQ8NGA2 310 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 GIMAP5Q96F15 307 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 ADOQ96SZ5 270 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 BHLHE41Q9C0J9 482 aaPredicted RBP11.68□□□□□ -0.54
CLCN3-210ENST00000515420 EXO5Q9H790 373 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 ZNF395Q9H8N7 513 aaPredicted RBP11.68□□□□□ -0.54
CLCN3-210ENST00000515420 AKTIPQ9H8T0 292 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 HHATLQ9HCP6 504 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 ARGLU1Q9NWB6 273 aaPredicted RBP11.68□□□□□ -0.54
CLCN3-210ENST00000515420 GIN1Q9NXP7 522 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 ACAD8Q9UKU7 415 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 WIF1Q9Y5W5 379 aa11.68□□□□□ -0.54
CLCN3-210ENST00000515420 NUP214P35658 2090 aaPredicted RBP11.67□□□□□ -0.54
CLCN3-210ENST00000515420 ARHGAP21Q5T5U3 1957 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 A0A1W2PRB8 838 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 TRPC5OSA6NMA1 111 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 SLCO1B7G3V0H7 640 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 NKX2-2O95096 273 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 IL33O95760 270 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 LAMP1P11279 417 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 G6PDP11413 515 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 GABRA1P14867 456 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 ENDOUP21128 410 aaKnown RBP11.67□□□□□ -0.54
CLCN3-210ENST00000515420 ACVR2AP27037 513 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 LCN1P31025 176 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 PTGER4P35408 488 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 GAB1Q13480 694 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 DPY19L1Q2PZI1 675 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 LSM12Q3MHD2 195 aaKnown RBP11.67□□□□□ -0.54
CLCN3-210ENST00000515420 NHSL2Q5HYW2 709 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 EXOSC6Q5RKV6 272 aaKnown RBP11.67□□□□□ -0.54
CLCN3-210ENST00000515420 ANGPTL8Q6UXH0 198 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 ACAD11Q709F0 780 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 NUP43Q8NFH3 380 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 OR4N2Q8NGD1 307 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 SFXN5Q8TD22 340 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 OR5P2Q8WZ92 322 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 MOAP1Q96BY2 351 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 GNRHR2Q96P88 292 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 NUF2Q9BZD4 464 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 VIPAS39Q9H9C1 493 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 GALNT9Q9HCQ5 603 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 SIRT3Q9NTG7 399 aaPredicted RBP11.67□□□□□ -0.54
CLCN3-210ENST00000515420 MRPS18CQ9Y3D5 142 aaKnown RBP11.67□□□□□ -0.54
CLCN3-210ENST00000515420 HRH3Q9Y5N1 445 aa11.67□□□□□ -0.54
CLCN3-210ENST00000515420 GNB5O14775 395 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms