RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 OR7G1Q8NGA0 311 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 OR52P1PQ8NH57 321 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 OR51Q1Q8NH59 317 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 CDS1Q92903 461 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 NAT6Q93015 286 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 SLC35B4Q969S0 331 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 CCDC74AQ96AQ1 378 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 ZNF501Q96CX3 271 aaPredicted RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 DGCR14Q96DF8 476 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 RBM18Q96H35 190 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 PEX11GQ96HA9 241 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 TUBA1CQ9BQE3 449 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 ALOXE3Q9BYJ1 711 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 RBM38Q9H0Z9 239 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 RIBC2Q9H4K1 309 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 ANKRA2Q9H9E1 313 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 ZNF556Q9HAH1 456 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 CAPN10Q9HC96 672 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 C11orf16Q9NQ32 467 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 EQTNQ9NQ60 294 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 LANCL2Q9NS86 450 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 PLCXD1Q9NUJ7 323 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 HCN3Q9P1Z3 774 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 SERTAD3Q9UJW9 196 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 GMEB2Q9UKD1 530 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 WDR45Q9Y484 360 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 CHST2Q9Y4C5 530 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 PCDHGB1Q9Y5G3 927 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 GMPPBQ9Y5P6 360 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 U3KQA8 63 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 FER1L5A0AVI2 2057 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 ZFHX4Q86UP3 3567 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 ANKRD11Q6UB99 2663 aaPredicted RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 IGKV3D-11A0A0A0MRZ8 115 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 MYOCOSA0A1B0GUC4 107 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 TGFBR3LH3BV60 316 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 ZNF701M0R085 212 aaPredicted RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 SLC1A7O00341 560 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 OR10H2O60403 315 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 BRINP1O60477 761 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 FCMRO60667 390 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 FMO6PO60774 539 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 PRAMEF2O60811 474 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 UGT2B17O75795 530 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 SEC24DO94855 1032 aaPredicted RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 OR5F1O95221 314 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 CPNE6O95741 557 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 ATP6V1B1P15313 513 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 ELK4P28324 431 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 IFNA8P32881 189 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 TRHRP34981 398 aaPredicted RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 YAP1P46937 504 aaKnown RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 EMDP50402 254 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 EEF1A1P68104 462 aaKnown RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 ID2Q02363 134 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 ACY1Q03154 408 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 SLC13A2Q13183 592 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 ILKQ13418 452 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 DSG2Q14126 1118 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 MAD2L1BPQ15013 274 aaPredicted RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 NPTX1Q15818 432 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 MEP1AQ16819 746 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 PROX2Q3B8N5 592 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 ZBED5Q49AG3 693 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 CYP27C1Q4G0S4 372 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 DCST2Q5T1A1 773 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 BROXQ5VW32 411 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 C1orf94Q6P1W5 598 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 DGAT2L6Q6ZPD8 337 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 ARHGAP22Q7Z5H3 698 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 GALNT5Q7Z7M9 940 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 SATL1Q86VE3 508 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 COMTD1Q86VU5 262 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 RBM45Q8IUH3 476 aaKnown RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 GRAMD2AQ8IUY3 354 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 LACC1Q8IV20 430 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 GPR135Q8IZ08 494 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 DEPDC4Q8N2C3 294 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 COX18Q8N8Q8 333 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 DTWD2Q8NBA8 298 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 SIMC1Q8NDZ2 872 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 OR4D9Q8NGE8 314 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 OR52R1Q8NGF1 315 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 OR6T1Q8NGN1 323 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 OR1L3Q8NH93 324 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 SLC9A6Q92581 669 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 PIGKQ92643 395 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 RIT1Q92963 219 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 MMABQ96EY8 250 aaPredicted RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 VSTM2LQ96N03 204 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 DGAT2Q96PD7 388 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 WFDC6Q9BQY6 131 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 FNDC11Q9BVV2 318 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 DUSP21Q9H596 190 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 CACYBPQ9HB71 228 aaKnown RBP7.79□□□□□ -1.16
RNF4-220ENST00000513578 FANCEQ9HB96 536 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 FOLH1BQ9HBA9 442 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 ADAP2Q9NPF8 381 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 MAN2C1Q9NTJ4 1040 aa7.79□□□□□ -1.16
RNF4-220ENST00000513578 RLIMQ9NVW2 624 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms