RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 GTF2F2P13984 249 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 MAOAP21397 527 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 GRPRP30550 384 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 DCDP81605 110 aaKnown RBP8.48□□□□□ -1.05
VCAN-208ENST00000512590 LBX2Q6XYB7 198 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 SLC26A9Q7LBE3 791 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ZDHHC21Q8IVQ6 265 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 PYDC1Q8WXC3 89 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 NXNL1Q96CM4 212 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 TSPAN10Q9H1Z9 355 aaPredicted RBP8.48□□□□□ -1.05
VCAN-208ENST00000512590 PLEKHJ1Q9NW61 149 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 C14orf119Q9NWQ9 140 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 HSFX1Q9UBD0 423 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 CAMSAP1Q5T5Y3 1602 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 B4DXG7 233 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 PROM1O43490 865 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 IDUAP35475 653 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 LSSP48449 732 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 RORCP51449 518 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 EFNA3P52797 238 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 SUB1P53999 127 aaKnown RBP eCLIP8.48□□□□□ -1.05
VCAN-208ENST00000512590 ATP1B3P54709 279 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 TRAM2Q15035 370 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 SULF2Q8IWU5 870 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 OR10G2Q8NGC3 310 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 APH1AQ96BI3 265 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 FAM46AQ96IP4 442 aaKnown RBP8.48□□□□□ -1.05
VCAN-208ENST00000512590 SERINC2Q96SA4 455 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 PCDHAC1Q9H158 963 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 RGCCQ9H4X1 137 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 MAGI3Q5TCQ9 1506 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 TARBP1Q13395 1621 aaKnown RBP8.48□□□□□ -1.05
VCAN-208ENST00000512590 A0A0J9YY10 115 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 AK1P00568 194 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ATXN7L3Q14CW9 347 aaPredicted RBP8.48□□□□□ -1.05
VCAN-208ENST00000512590 CTSL3PQ5NE16 218 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 C6orf89Q6UWU4 347 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 CNTN4Q8IWV2 1026 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 FAM217AQ8IXS0 508 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 CSNK2A3Q8NEV1 391 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 OR4K1Q8NGD4 311 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ACTRT1Q8TDG2 376 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ZNF641Q96N77 438 aaPredicted RBP8.48□□□□□ -1.05
VCAN-208ENST00000512590 IP6K3Q96PC2 410 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ULBP2Q9BZM5 246 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 WWTR1Q9GZV5 400 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 SEMA4AQ9H3S1 761 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 GPATCH2Q9NW75 528 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 A0A1B0GV50 99 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 AURKAO14965 403 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 FMO6PO60774 539 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 BEST1O76090 585 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ADRB2P07550 413 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 FCGR2AP12318 317 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 MAGP20916 626 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 SOX3P41225 446 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 CTXN1P60606 82 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 EDDM3AQ14507 147 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 PLXDC2Q6UX71 529 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 UNQ9370/PRO34162Q6UXP9 181 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 UBALD2Q8IYN6 164 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 IFI44Q8TCB0 444 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 MSANTD3Q96H12 275 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 FUZQ9BT04 418 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ZDHHC7Q9NXF8 308 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 GDE1Q9NZC3 331 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 SAGE2PA6NJ88 616 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 CASC3O15234 703 aaKnown RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 KNG1P01042 644 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 IL1RNP18510 177 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 SCTRP47872 440 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 HTR5AP47898 357 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 SLC6A8P48029 635 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 RPL23AP62750 156 aaKnown RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 MEF2AQ02078 507 aaPredicted RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 CRYZQ08257 329 aaKnown RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 RPA4Q13156 261 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 GPR107Q5VW38 600 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 CLEC6AQ6EIG7 209 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 IL34Q6ZMJ4 242 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 SPIN2AQ99865 258 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 SPIN2BQ9BPZ2 258 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 ALOXE3Q9BYJ1 711 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 SEMA6BQ9H3T3 888 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 FOLH1BQ9HBA9 442 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 MBD5Q9P267 1494 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 FAM166BA8MTA8 275 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 EMC8O43402 210 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 PPIHO43447 177 aaKnown RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 ETV3P41162 512 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 CYB561P49447 251 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 RPS16P62249 146 aaKnown RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 NKX3-2P78367 333 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 COL9A3Q14050 684 aaPredicted RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 TYSND1Q2T9J0 566 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 FAM174BQ3ZCQ3 159 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 FRG2Q64ET8 278 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 HEPHL1Q6MZM0 1159 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 AGTRAPQ6RW13 159 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 LCLAT1Q6UWP7 414 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms