RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-208	ENST00000512392	CYB561D2	O14569	222 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	RAB29	O14966	203 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	FOXN1	O15353	648 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	CLOCK	O15516	846 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	LYPLA2	O95372	231 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	FABP1	P07148	127 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	PRF1	P14222	555 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	ST6GAL1	P15907	406 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	PRPS1L1	P21108	318 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	CFP	P27918	469 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	PSMB5	P28074	263 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	SLC1A4	P43007	532 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	PHEX	P78562	749 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	OCA2	Q04671	838 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	FOXE3	Q13461	319 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	SERTAD2	Q14140	314 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	HNF4G	Q14541	408 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	VAMP3	Q15836	100 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	UAP1	Q16222	522 aa	Predicted RBP	5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	SFT2D3	Q587I9	215 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	LY6G6F	Q5SQ64	297 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	DOK6	Q6PKX4	331 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	DHRS13	Q6UX07	377 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	DEF8	Q6ZN54	512 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	MBOAT1	Q6ZNC8	495 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	UTS2B	Q765I0	119 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	G2E3	Q7L622	706 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	ERICH1	Q86X53	443 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	CDK20	Q8IZL9	346 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	ARHGAP18	Q8N392	663 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	FAM89B	Q8N5H3	189 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	SLC5A8	Q8N695	610 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	CCDC185	Q8N715	623 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	OR56A1	Q8NGH5	318 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	OR2L8	Q8NGY9	312 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	ZBTB8A	Q96BR9	441 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	RNF183	Q96D59	192 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	ZNF503	Q96F45	646 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	RANBP9	Q96S59	729 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	FMO2	Q99518	471 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	POLDIP3	Q9BY77	421 aa	Known RBP	5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	SRR	Q9GZT4	340 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	C1orf198	Q9H425	327 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	AGO3	Q9H9G7	860 aa	Known RBP	5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	ABCD2	Q9UBJ2	740 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	EPHA6	Q9UF33	1036 aa		5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	ZNF490	Q9ULM2	529 aa	Predicted RBP	5.69	□□□□□ -1.5
CHD1-208	ENST00000512392	CCL24	O00175	119 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	LIN7A	O14910	233 aa	Predicted RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	STX7	O15400	261 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	SCGN	O76038	276 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	TXNDC12	O95881	172 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	VTN	P04004	478 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	ELANE	P08246	267 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	HAPLN1	P10915	354 aa	Predicted RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	FPR3	P25089	353 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	HLA-DMA	P28067	261 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	HNRNPH1	P31943	449 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	APOBEC1	P41238	236 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	RPL21	P46778	160 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	NPBWR2	P48146	333 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	NPY2R	P49146	381 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	HNRNPH2	P55795	449 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	CD81	P60033	236 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	RPS7	P62081	194 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	ADARB1	P78563	741 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	PKP1	Q13835	747 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	PTPRR	Q15256	657 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	TNXA	Q16473	311 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	CDKN3	Q16667	212 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	HIST2H2AA3	Q6FI13	130 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	KIRREL2	Q6UWL6	708 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	NIPA1	Q7RTP0	329 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	MMAA	Q8IVH4	418 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	BEST3	Q8N1M1	668 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	PELI3	Q8N2H9	469 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	CCDC197	Q8NCU1	140 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	C19orf18	Q8NEA5	215 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	HMGCLL1	Q8TB92	370 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	TCP10L	Q8TDR4	215 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	CA5BP1	Q8WTZ4	195 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	PTCD3	Q96EY7	689 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	MAP1LC3C	Q9BXW4	147 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	LRRC2	Q9BYS8	371 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	MYEF2	Q9P2K5	600 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	GNG12	Q9UBI6	72 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	MIOX	Q9UGB7	285 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	ACSL5	Q9ULC5	683 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	ZFR2	Q9UPR6	939 aa	Known RBP	5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	POLDIP2	Q9Y2S7	368 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	RIPK3	Q9Y572	518 aa		5.68	□□□□□ -1.5
CHD1-208	ENST00000512392	LRPPRC	P42704	1394 aa	Known RBP	5.67	□□□□□ -1.5
CHD1-208	ENST00000512392	CCT8L1P	A6NM43	557 aa		5.67	□□□□□ -1.5
CHD1-208	ENST00000512392	LRRN3	E7EW58	273 aa		5.67	□□□□□ -1.5
CHD1-208	ENST00000512392	SYT7	O43581	403 aa		5.67	□□□□□ -1.5
CHD1-208	ENST00000512392	SCO2	O43819	266 aa		5.67	□□□□□ -1.5
CHD1-208	ENST00000512392	SRPX2	O60687	465 aa	Predicted RBP	5.67	□□□□□ -1.5
CHD1-208	ENST00000512392	GPANK1	O95872	356 aa		5.67	□□□□□ -1.5
CHD1-208	ENST00000512392	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms