RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 GBAP04062 536 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 ALPPP05187 535 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 GOT1P17174 413 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 ADRA2CP18825 462 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 GLRA2P23416 452 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 F8A1P23610 371 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 AKT2P31751 481 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 MAGEA11P43364 429 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 RPL21P46778 160 aaKnown RBP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 BMXP51813 675 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 CAPZA1P52907 286 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 GSDMDP57764 484 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 TRA2AQ13595 282 aaKnown RBP eCLIP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 HERC3Q15034 1050 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 CST6Q15828 149 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 FAM174BQ3ZCQ3 159 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 CHRFAM7AQ494W8 412 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 XKR6Q5GH73 641 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 SLC35D3Q5M8T2 416 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 CAVIN1Q6NZI2 390 aaKnown RBP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 ARHGAP11AQ6P4F7 1023 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 MOXD1Q6UVY6 613 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 PET117Q6UWS5 81 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 ENPP7Q6UWV6 458 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 ALKAL1Q6UXT8 129 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 IL17RELQ6ZVW7 336 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 OTUD6AQ7L8S5 288 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 SPATA19Q7Z5L4 167 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 PTAR1Q7Z6K3 402 aaPredicted RBP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 SLC47A2Q86VL8 602 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 CATSPER3Q86XQ3 398 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 HIPK1Q86Z02 1210 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 KIRREL3Q8IZU9 778 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 SLC22A18ASQ8N1D0 253 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 RYBPQ8N488 228 aaPredicted RBP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 RASGEF1AQ8N9B8 481 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 Q8N9G6 341 aaPredicted RBP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 FDCSPQ8NFU4 85 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 GOT1L1Q8NHS2 421 aaPredicted RBP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 SHC3Q92529 594 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 NSMAFQ92636 917 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 PROX1Q92786 737 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 TAF15Q92804 592 aaKnown RBP eCLIP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 CCDC127Q96BQ5 260 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 VMP1Q96GC9 406 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 SENP8Q96LD8 212 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 NUDT9Q9BW91 350 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 PANK2Q9BZ23 570 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 PRRG4Q9BZD6 226 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 NACA2Q9H009 215 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 ZMYND12Q9H0C1 365 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 GLT8D2Q9H1C3 349 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 LIME1Q9H400 295 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 XAB2Q9HCS7 855 aaKnown RBP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 FAM207AQ9NSI2 230 aaPredicted RBP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 SUN2Q9UH99 717 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 LSM7Q9UK45 103 aaKnown RBP3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 PLA2G4CQ9UP65 541 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 BTRCQ9Y297 605 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 CA5BQ9Y2D0 317 aa3.08□□□□□ -1.92
TOPBP1-208ENST00000511439 IGHV4-4A0A075B6R2 117 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 A0A087X002 238 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 ERICH2A1L162 156 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 HTR3EA5X5Y0 456 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 MSGN1A6NI15 193 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 IDSB3KWA1 339 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 O00370 1275 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 SLC7A4O43246 635 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 SNX3O60493 162 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 KHDRBS3O75525 346 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 CPNE6O95741 557 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 IDSP22304 550 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 CYP2F1P24903 491 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 ANXA13P27216 316 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 YWHABP31946 246 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 ARL2P36404 184 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 RGS7P49802 495 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 ATP12AP54707 1039 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 NAPAP54920 295 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 KCNK10P57789 538 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 OSTNP61366 133 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 OTUD4Q01804 1114 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 GCNT1Q02742 428 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 RASGEF1BQ0VAM2 473 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 ITGA9Q13797 1035 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 FZD2Q14332 565 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 SQLEQ14534 574 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 FCN2Q15485 313 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 CLPPQ16740 277 aaPredicted RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 CTU2Q2VPK5 515 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 CFAP221Q4G0U5 840 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 SLC25A53Q5H9E4 307 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 FFAR4Q5NUL3 377 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 FAM91A1Q658Y4 838 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 OR4A47Q6IF82 309 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 TMEM207Q6UWW9 146 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 SPATA21Q7Z572 469 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 MEX3DQ86XN8 651 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 TIGD4Q8IY51 512 aa3.07□□□□□ -1.92
TOPBP1-208ENST00000511439 LRRC17Q8N6Y2 441 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms