RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 C9J4A7 227 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 SLC22A2O15244 555 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 POLR2DO15514 142 aaKnown RBP5.57□□□□□ -1.52
USP53-206ENST00000510737 ZNF749O43361 778 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 STX10O60499 249 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 F10P00742 488 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 ZNF23P17027 643 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 MSH3P20585 1137 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 ARG2P78540 354 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 INAQ16352 499 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 MEA1Q16626 185 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 SLC25A52Q3SY17 297 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 C6orf141Q5SZD1 244 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 ABRAXAS1Q6UWZ7 409 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 RRM2BQ7LG56 351 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 MARVELD2Q8N4S9 558 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 EXD1Q8NHP7 514 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 PSMF1Q92530 271 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 PHF21AQ96BD5 680 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 SMIM14Q96QK8 99 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 USP28Q96RU2 1077 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 TRIM15Q9C019 465 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 PDFQ9HBH1 243 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 GPATCH2LQ9NWQ4 482 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 COQ3Q9NZJ6 369 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 VPS18Q9P253 973 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 GPR52Q9Y2T5 361 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 JRKLQ9Y4A0 524 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 CACNA1CQ13936 2221 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 KMT2CQ8NEZ4 4911 aaKnown RBP5.56□□□□□ -1.52
USP53-206ENST00000510737 A0A0J9YWU9 116 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 FAM237BA0A1B0GVD1 139 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 SLC9B1P1A6NJY1 282 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 ANKRD28O15084 1053 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 ARHGEF9O43307 516 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 MED7O43513 233 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 RAF1P04049 648 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 ZNF30P17039 623 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 CDAP32320 146 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 OLIG2Q13516 323 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 SNTB1Q13884 538 aaKnown RBP5.56□□□□□ -1.52
USP53-206ENST00000510737 ZCWPW2Q504Y3 356 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 C1orf189Q5VU69 101 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 SHEQ5VZ18 495 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 PODNL1Q6PEZ8 512 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 PAMR1Q6UXH9 720 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 ZNF440Q8IYI8 595 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 MAGED4Q96JG8 741 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 GPR137Q96N19 417 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 VGLL1Q99990 258 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 PSD2Q9BQI7 771 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 RIOK2Q9BVS4 552 aaKnown RBP5.56□□□□□ -1.52
USP53-206ENST00000510737 OSGEPL1Q9H4B0 414 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 KCNJ16Q9NPI9 418 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 SLC6A13Q9NSD5 602 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 HRASLS2Q9NWW9 162 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 STMN3Q9NZ72 180 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 ATXN10Q9UBB4 475 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 UBA2Q9UBT2 640 aaPredicted RBP5.56□□□□□ -1.52
USP53-206ENST00000510737 STAP1Q9ULZ2 295 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 WDR37Q9Y2I8 494 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 L3MBTL1Q9Y468 752 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 TGP01266 2768 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 AKAP6Q13023 2319 aa5.56□□□□□ -1.52
USP53-206ENST00000510737 TMEM150CB9EJG8 249 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 USP17L23D6RBM5 183 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 H3BMH7 237 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 TMEM178BH3BS89 294 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 PSMD11O00231 422 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 PHF1O43189 567 aaPredicted RBP5.55□□□□□ -1.52
USP53-206ENST00000510737 HOXB5P09067 269 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 CYP2A7P20853 494 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 UGT1A1P22309 533 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 MMP11P24347 488 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 YBEYP58557 167 aaPredicted RBP5.55□□□□□ -1.52
USP53-206ENST00000510737 ZNF239Q16600 458 aaKnown RBP5.55□□□□□ -1.52
USP53-206ENST00000510737 PTPN20Q4JDL3 420 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 PLEKHM3Q6ZWE6 761 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 Q75L30 129 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 CPSF7Q8N684 471 aaKnown RBP5.55□□□□□ -1.52
USP53-206ENST00000510737 PAF1Q8N7H5 531 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 GOT1L1Q8NHS2 421 aaPredicted RBP5.55□□□□□ -1.52
USP53-206ENST00000510737 SLC35C1Q96A29 364 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 PAGE5Q96GU1 130 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 CFAP57Q96MR6 1250 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 PCGF1Q9BSM1 259 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 SLC7A5P2Q9GIP4 190 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 CARD9Q9H257 536 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 MAGEF1Q9HAY2 307 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 FAM207AQ9NSI2 230 aaPredicted RBP5.55□□□□□ -1.52
USP53-206ENST00000510737 ZDHHC18Q9NUE0 388 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 EXOC1Q9NV70 894 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 TRIM10Q9UDY6 481 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 RNF6Q9Y252 685 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 HIVEP2P31629 2446 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 DOCK4Q8N1I0 1966 aa5.55□□□□□ -1.52
USP53-206ENST00000510737 HCFC1P51610 2035 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 PDZK1P1A8MUH7 402 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 E7EQ34 232 aa5.54□□□□□ -1.52
USP53-206ENST00000510737 NPIPA5E9PKD4 350 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms