RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 C16orf62Q7Z3J2 963 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 NANOGNBQ7Z5D8 188 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 CTAGE6Q86UF2 777 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 NBPF5PQ86XG9 351 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 GRAMD2AQ8IUY3 354 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 UBQLNLQ8IYU4 475 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZNF679Q8IYX0 411 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 GVQW1Q8N7I0 195 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 STEAP2Q8NFT2 490 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR5M9Q8NGP3 310 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR52J3Q8NH60 311 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZPLD1Q8TCW7 415 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 P3H4Q92791 437 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 AKR1E2Q96JD6 320 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 PSMB7Q99436 277 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 LGMNQ99538 433 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 PLIN2Q99541 437 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 APOOQ9BUR5 198 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 RBM24Q9BX46 236 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 CRNKL1Q9BZJ0 848 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 MTHFD2LQ9H903 347 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 SP140LQ9H930 580 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 RBM28Q9NW13 759 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 NMRK1Q9NWW6 199 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 GHRLQ9UBU3 117 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 TUBGCP4Q9UGJ1 667 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 MRPS33Q9Y291 106 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 SPACA6W5XKT8 324 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 NEDD4P46934 1319 aa3.39□□□□□ -1.87
TRAPPC13-209ENST00000508304 CARMIL1Q5VZK9 1371 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 A0A1W2PPR1 153 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 LOC390937A0A1W2PQ73 354 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 ANHXE9PGG2 379 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 H0Y8G0 127 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 CLDN5O00501 218 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 SDHDO14521 159 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 PRRG1O14668 218 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZNF208O43345 1280 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 BCL2L11O43521 198 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 TSPAN2O60636 221 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 SDC3O75056 442 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 DUSP11O75319 330 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 BCAS1O75363 584 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 CIB2O75838 187 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 TM7SF2O76062 418 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 GOT2P00505 430 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 PDHA2P29803 388 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 OXTRP30559 389 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 MTIF2P46199 727 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 RGS4P49798 205 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 SGSHP51688 502 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 SLC7A2P52569 658 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 RPL27P61353 136 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 CSNK2BP67870 215 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 IL9RQ01113 521 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 NCBP1Q09161 790 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 DDX39BQ13838 428 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 LY6DQ14210 128 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 PDK3Q15120 406 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZNF528Q3MIS6 628 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 LCLAT1Q6UWP7 414 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 PAQR9Q6ZVX9 377 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 LHFPL4Q7Z7J7 247 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 ARFGAP2Q8N6H7 521 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 POM121L12Q8N7R1 296 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 AQP11Q8NBQ7 271 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 OR13C2Q8NGS9 318 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 PCNPQ8WW12 178 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 FBXO32Q969P5 355 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 DHTKD1Q96HY7 919 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 TBC1D10AQ9BXI6 508 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 PINK1Q9BXM7 581 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 NFKBIZQ9BYH8 718 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 ELL3Q9HB65 397 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 NMUR1Q9HB89 426 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 KLRF1Q9NZS2 232 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 IKZF3Q9UKT9 509 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 NAALAD2Q9Y3Q0 740 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 AP4B1Q9Y6B7 739 aa3.38□□□□□ -1.87
TRAPPC13-209ENST00000508304 ZSCAN5CA6NGD5 496 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 FAM47DPA6NHR8 397 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 SRRM4A7MD48 611 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 A8MXK9 166 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 NPIPA2E9PIF3 369 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 PPIAL4DF5H284 164 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 H0YL77 283 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 TPST2O60704 377 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 SURF6O75683 361 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 CEACAM4O75871 244 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 UFL1O94874 794 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 IL1BP01584 269 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 MT-ND1P03886 318 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 AOC1P19801 751 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 PAX7P23759 505 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 RFC2P35250 354 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 CYLC1P35663 651 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 TRIM23P36406 574 aa3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 DHPSP49366 369 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 VCPP55072 806 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-209ENST00000508304 ATP5IP56385 69 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms