RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 PIKFYVEQ9Y2I7 2098 aa14.97□□□□□ -0.01
SCLT1-208ENST00000506368 CTDSPLO15194 276 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 CFDP00746 253 aaPredicted RBP14.96□□□□□ -0.01
SCLT1-208ENST00000506368 HOXB3P14651 431 aaPredicted RBP14.96□□□□□ -0.01
SCLT1-208ENST00000506368 SSTR2P30874 369 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 DGKEP52429 567 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 CNTN1Q12860 1018 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 ZNF155Q12901 538 aaPredicted RBP14.96□□□□□ -0.01
SCLT1-208ENST00000506368 ST3GAL2Q16842 350 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 EOGTQ5NDL2 527 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 LYPD4Q6UWN0 246 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 DEF8Q6ZN54 512 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 FAM83HQ6ZRV2 1179 aaPredicted RBP14.96□□□□□ -0.01
SCLT1-208ENST00000506368 CHMP1BQ7LBR1 199 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 GJD3Q8N144 294 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 SPICQ8N5J4 248 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 FAM71CQ8NEG0 241 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 C2orf15Q8WU43 125 aaKnown RBP14.96□□□□□ -0.01
SCLT1-208ENST00000506368 SECISBP2Q96T21 854 aaKnown RBP14.96□□□□□ -0.01
SCLT1-208ENST00000506368 FNDC11Q9BVV2 318 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 IFT22Q9H7X7 185 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 ACSL6Q9UKU0 697 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 A4GNTQ9UNA3 340 aa14.96□□□□□ -0.01
SCLT1-208ENST00000506368 SHISA3A0PJX4 238 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 GSTZ1O43708 216 aaPredicted RBP14.96□□□□□ -0.02
SCLT1-208ENST00000506368 LANCL1O43813 399 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 PEX14O75381 377 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 NCR1O76036 304 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 EPHX1P07099 455 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 FGF2P09038 288 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 MMP11P24347 488 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 WEE1P30291 646 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 CDH11P55287 796 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 ZNF169Q14929 603 aaPredicted RBP14.96□□□□□ -0.02
SCLT1-208ENST00000506368 ADGRF1Q5T601 910 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 METTL11BQ5VVY1 283 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 CDC73Q6P1J9 531 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 PODNL1Q6PEZ8 512 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 GPR135Q8IZ08 494 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 DTX3Q8N9I9 347 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 OR4K5Q8NGD3 323 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 C16orf78Q8WTQ4 265 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 SCARB1Q8WTV0 552 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 SLC38A5Q8WUX1 472 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 ASZ1Q8WWH4 475 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 HSD17B8Q92506 261 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 RIT1Q92963 219 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 CMTM3Q96MX0 182 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 SPRTNQ9H040 489 aaPredicted RBP14.96□□□□□ -0.02
SCLT1-208ENST00000506368 NEUROD4Q9HD90 331 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 GKN1Q9NS71 199 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 PTGFRNQ9P2B2 879 aa14.96□□□□□ -0.02
SCLT1-208ENST00000506368 DNMT3AQ9Y6K1 912 aaPredicted RBP14.96□□□□□ -0.02
SCLT1-208ENST00000506368 NAP1L6A6NFF2 107 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 AIPO00170 330 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 TBX19O60806 448 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 UBXN7O94888 489 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 GIPP09681 153 aaPredicted RBP14.95□□□□□ -0.02
SCLT1-208ENST00000506368 CPN1P15169 458 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 TSPAN5P62079 268 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 RPS13P62277 151 aaKnown RBP14.95□□□□□ -0.02
SCLT1-208ENST00000506368 SCRN3Q0VDG4 424 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 GPNMBQ14956 572 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 RETSATQ6NUM9 610 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 RASSF6Q6ZTQ3 369 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 ZER1Q7Z7L7 766 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 DCAF4L2Q8NA75 395 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 OR56A3Q8NH54 315 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 GNPDA2Q8TDQ7 276 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 WDR34Q96EX3 536 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 AHCYL2Q96HN2 611 aaKnown RBP14.95□□□□□ -0.02
SCLT1-208ENST00000506368 EFCAB11Q9BUY7 163 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 FAIM2Q9BWQ8 316 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 SLC9A8Q9Y2E8 581 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 NPFFR2Q9Y5X5 522 aa14.95□□□□□ -0.02
SCLT1-208ENST00000506368 LOC105369274A0A096LPK9 316 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 ANKRD61A6NGH8 418 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 RNF13O43567 381 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SEMA7AO75326 666 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 HMGN1P05114 100 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 BCHEP06276 602 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 EIF4EP06730 217 aaKnown RBP14.94□□□□□ -0.02
SCLT1-208ENST00000506368 GIFP27352 417 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 BLVRAP53004 296 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 CASP9P55211 416 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 B4GALNT1Q00973 533 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 DSC1Q08554 894 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 AGTRAPQ6RW13 159 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 LINGO4Q6UY18 593 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 TPRG1Q6ZUI0 275 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 OR4N4Q8N0Y3 316 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 CELF5Q8N6W0 485 aaKnown RBP14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SAMD12Q8N8I0 201 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 CLRN3Q8NCR9 226 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 GPR156Q8NFN8 814 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 OR5P2Q8WZ92 322 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 YIPF5Q969M3 257 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 MARC2Q969Z3 335 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 TMEM19Q96HH6 336 aa14.94□□□□□ -0.02
SCLT1-208ENST00000506368 SFXN2Q96NB2 322 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms