RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 GFRA1P56159 465 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 B3GALT5-AS1P59052 145 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 ACSM2AQ08AH3 577 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 PCLAFQ15004 111 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 TOMM20Q15388 145 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 DEFB113Q30KQ7 82 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 ZNF385BQ569K4 471 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 SPIN4Q56A73 249 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 C6orf163Q5TEZ5 329 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 NSUN5P2Q63ZY6 315 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 ACSM2BQ68CK6 577 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 ANKRD26P1Q6NSI1 321 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 TMEM107Q6UX40 140 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 TRIM46Q7Z4K8 759 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 CAMKMTQ7Z624 323 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 C4orf33Q8N1A6 199 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 CDC26Q8NHZ8 85 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 EFHD2Q96C19 240 aaPredicted RBP11.93□□□□□ -0.5
DDX41-204ENST00000504807 COL21A1Q96P44 957 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 TUBA1CQ9BQE3 449 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 OR2B2Q9GZK3 357 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 GLIPR2Q9H4G4 154 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 ANKZF1Q9H8Y5 726 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 PFDN4Q9NQP4 134 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 KLRF1Q9NZS2 232 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 CRIM1Q9NZV1 1036 aa11.93□□□□□ -0.5
DDX41-204ENST00000504807 MBD3L4A6NDZ8 208 aaPredicted RBP11.92□□□□□ -0.5
DDX41-204ENST00000504807 MBD3L3A6NE82 208 aaPredicted RBP11.92□□□□□ -0.5
DDX41-204ENST00000504807 OR6C70A6NIJ9 312 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 MBD3L5A6NJ08 208 aaPredicted RBP11.92□□□□□ -0.5
DDX41-204ENST00000504807 AHRRA9YTQ3 701 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 TMEM233B4DJY2 109 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 UPK1AO00322 258 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 PLOD3O60568 738 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 GLRA3O75311 464 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 ERN1O75460 977 aaKnown RBP11.92□□□□□ -0.5
DDX41-204ENST00000504807 REM1O75628 298 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 CYP4B1P13584 511 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 KRT15P19012 456 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 DDCP20711 480 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 CRHR1P34998 444 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 C2orf80Q0P641 193 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 SLC25A35Q3KQZ1 300 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 SPDYAQ5MJ70 313 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 SLC30A6Q6NXT4 461 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 ARSKQ6UWY0 536 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 ADGRE4PQ86SQ3 457 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 CDC20BQ86Y33 519 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 C10orf107Q8IVU9 208 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 SLC44A2Q8IWA5 706 aaPredicted RBP11.92□□□□□ -0.5
DDX41-204ENST00000504807 GOT1L1Q8NHS2 421 aaPredicted RBP11.92□□□□□ -0.5
DDX41-204ENST00000504807 MBD3L2Q8NHZ7 208 aaPredicted RBP11.92□□□□□ -0.5
DDX41-204ENST00000504807 UBLCP1Q8WVY7 318 aaPredicted RBP11.92□□□□□ -0.5
DDX41-204ENST00000504807 ABTB1Q969K4 478 aaPredicted RBP11.92□□□□□ -0.5
DDX41-204ENST00000504807 KLHDC3Q9BQ90 382 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 L2HGDHQ9H9P8 463 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 SLC24A3Q9HC58 644 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 OXSMQ9NWU1 459 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 NMRK1Q9NWW6 199 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 PRODH2Q9UF12 536 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 GIMAP2Q9UG22 337 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 DCDC2Q9UHG0 476 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 PSME2Q9UL46 239 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 WIF1Q9Y5W5 379 aa11.92□□□□□ -0.5
DDX41-204ENST00000504807 ZANQ9Y493 2812 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 NPIPB8E9PQR5 432 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 H0YC42 278 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 WIPF1O43516 503 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 ZIC3O60481 467 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 IGKV1D-16P01601 117 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 CHRNGP07510 517 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 UQCRC1P31930 480 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 TIMP3P35625 211 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 LHX2P50458 406 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 NCBP2P52298 156 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDX41-204ENST00000504807 TPD52P55327 224 aaPredicted RBP11.91□□□□□ -0.5
DDX41-204ENST00000504807 CLDN15P56746 228 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 DNAJB13P59910 316 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 DCAF7P61962 342 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 SLC18A2Q05940 514 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 ZNF763Q0D2J5 394 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 SNTA1Q13424 505 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 NOXRED1Q6NXP6 359 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 PAMR1Q6UXH9 720 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 Q6ZSR9 355 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 LARP4Q71RC2 724 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDX41-204ENST00000504807 ZNF551Q7Z340 670 aaPredicted RBP11.91□□□□□ -0.5
DDX41-204ENST00000504807 TDRPQ86YL5 185 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 LACC1Q8IV20 430 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 TRIM42Q8IWZ5 723 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 FAM9CQ8IZT9 166 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 CLYBLQ8N0X4 340 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 GFM2Q969S9 779 aaKnown RBP11.91□□□□□ -0.5
DDX41-204ENST00000504807 CIDECQ96AQ7 238 aaPredicted RBP11.91□□□□□ -0.5
DDX41-204ENST00000504807 FCRL1Q96LA6 429 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 AMDHD1Q96NU7 426 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 GATA5Q9BWX5 397 aaPredicted RBP11.91□□□□□ -0.5
DDX41-204ENST00000504807 MYNNQ9NPC7 610 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 RASSF1Q9NS23 344 aa11.91□□□□□ -0.5
DDX41-204ENST00000504807 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms