RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 EXOSC1Q9Y3B2 195 aaKnown RBP16.81■□□□□ 0.28
POLR2J3-209ENST00000504157 TRAV20A0A0B4J274 112 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 ANKDD1BA6NHY2 528 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 TMEM189-UBE2V1I3L0A0 370 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 SDC3O75056 442 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 TFP02787 698 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 NPR2P20594 1047 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 TIA1P31483 386 aaKnown RBP eCLIP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 CCR6P51684 374 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 DSC1Q08554 894 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 ZNF385BQ569K4 471 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 IDNKQ5T6J7 187 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 CXorf57Q6NSI4 855 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 KIAA1211LQ6NV74 962 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 TOMM5Q8N4H5 51 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 LRR1Q96L50 414 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 C10orf90Q96M02 699 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 TEFMQ96QE5 360 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 C7orf50Q9BRJ6 194 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 NLGN3Q9NZ94 848 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 GULP1Q9UBP9 304 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 SLC45A1Q9Y2W3 748 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 NFATC1O95644 943 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 ACP2P11117 423 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 ELAVL4P26378 380 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 LIM2P55344 173 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 MAZP56270 477 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 RHOAP61586 193 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 PUM1Q14671 1186 aaKnown RBP eCLIP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 SFRP5Q5T4F7 317 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 CD300LDQ6UXZ3 194 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 DBX2Q6ZNG2 339 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 SIAH3Q8IW03 269 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 ATAD1Q8NBU5 361 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 KCTD12Q96CX2 325 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 DMRTA2Q96SC8 542 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 MTERF1Q99551 399 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 WRAP53Q9BUR4 548 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 TMED9Q9BVK6 235 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 POLR2J3Q9H1A7 115 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 FN3KQ9H479 309 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 REEP4Q9H6H4 257 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 ASB6Q9NWX5 421 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 PIPOXQ9P0Z9 390 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 SLC9A8Q9Y2E8 581 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 CHST2Q9Y4C5 530 aa16.8■□□□□ 0.28
POLR2J3-209ENST00000504157 LIMS3P0CW19 117 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 LIMS4P0CW20 117 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 CCND3P30281 292 aaPredicted RBP16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 RAB8AP61006 207 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 EFNB1P98172 346 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 PDE7AQ13946 482 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 SEC23BQ15437 767 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 PRAMEF19Q5SWL8 479 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 DCST1Q5T197 706 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 HBMQ6B0K9 141 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 PGBD2Q6P3X8 592 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 CORO6Q6QEF8 472 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 LINGO4Q6UY18 593 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 RAB11FIP2Q7L804 512 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 ZDHHC1Q8WTX9 485 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 CAPNS2Q96L46 248 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 YIPF4Q9BSR8 244 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 NPDC1Q9NQX5 325 aaPredicted RBP16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 MARK1Q9P0L2 795 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 RPS6KB2Q9UBS0 482 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 EPHA6Q9UF33 1036 aa16.79■□□□□ 0.28
POLR2J3-209ENST00000504157 TEX46H3BTG2 121 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 PEX14O75381 377 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 RP2O75695 350 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 GLAP06280 429 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 GALP22466 123 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 SOX18P35713 384 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 PLD1Q13393 1074 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 SF1Q15637 639 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 MFSD14CQ5VZR4 134 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 NR2C2APQ86WQ0 139 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 FUZQ9BT04 418 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 PRKAG2Q9UGJ0 569 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 ERVK-19Q9WJR5 959 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 CA5BQ9Y2D0 317 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 Q9Y3F1 56 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 IGLV3-16A0A075B6K0 115 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 C2orf92A0A1B0GVN3 265 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 SSX5O60225 188 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 GPR37L1O60883 481 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 KDM4BO94953 1096 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 ETHE1O95571 254 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 C6orf47O95873 294 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 IFNA4P05014 189 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 FABP1P07148 127 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 CTSHP09668 335 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 S100A11P31949 105 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 RPL3P39023 403 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 MTNR1BP49286 362 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 DGKGP49619 791 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 SGSHP51688 502 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 BEX3Q00994 111 aa16.78■□□□□ 0.28
POLR2J3-209ENST00000504157 DEFA5Q01523 94 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms