RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PI4KAP42356 2102 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 SCN2AQ99250 2005 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 USP34Q70CQ2 3546 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 CPED1A4D0V7 1026 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 FAAHO00519 579 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 STX11O75558 287 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 UGT2B17O75795 530 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 NKX2-2O95096 273 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 CBLP22681 906 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 FOXB2Q5VYV0 432 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF770Q6IQ21 691 aaPredicted RBP20.5■□□□□ 0.87
PTPN13-205ENST00000502971 HMGN2P46Q86SG4 172 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 SATL1Q86VE3 508 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 OR9Q2Q8NGE9 314 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 OR1F2PQ96R84 312 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 PRRX2Q99811 253 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 LMF2Q9BU23 707 aaKnown RBP20.5■□□□□ 0.87
PTPN13-205ENST00000502971 POLE3Q9NRF9 147 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 MKLN1Q9UL63 735 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 MMACHCQ9Y4U1 282 aa20.5■□□□□ 0.87
PTPN13-205ENST00000502971 A0A1W2PRQ8 180 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 THBS1P07996 1170 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 ALAS2P22557 587 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 ELAVL4P26378 380 aaKnown RBP20.49■□□□□ 0.87
PTPN13-205ENST00000502971 CDH15P55291 814 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 RPP38P78345 283 aaKnown RBP20.49■□□□□ 0.87
PTPN13-205ENST00000502971 IL5RAQ01344 420 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF155Q12901 538 aaPredicted RBP20.49■□□□□ 0.87
PTPN13-205ENST00000502971 DUSP8Q13202 625 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 DGCR6Q14129 220 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 LARS2Q15031 903 aaKnown RBP20.49■□□□□ 0.87
PTPN13-205ENST00000502971 MEP1AQ16819 746 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 FGD3Q5JSP0 725 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF619Q8N2I2 560 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 PARP8Q8N3A8 854 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 C7orf57Q8NEG2 295 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 GPR151Q8TDV0 419 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 ADAMTS16Q8TE57 1224 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 NAT6Q93015 286 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF501Q96CX3 271 aaPredicted RBP20.49■□□□□ 0.87
PTPN13-205ENST00000502971 HRASLS5Q96KN8 279 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 NIPSNAP1Q9BPW8 284 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 FNDC11Q9BVV2 318 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 NDOR1Q9UHB4 597 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF443Q9Y2A4 671 aaPredicted RBP20.49■□□□□ 0.87
PTPN13-205ENST00000502971 MAU2Q9Y6X3 613 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 SDK1Q7Z5N4 2213 aa20.49■□□□□ 0.87
PTPN13-205ENST00000502971 TRBV4-1A0A0J9YWV2 114 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 GUSBP08236 651 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 ANKRD34CP0C6C1 535 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 GABRA3P34903 492 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 POU6F2P78424 691 aaPredicted RBP20.48■□□□□ 0.87
PTPN13-205ENST00000502971 PIN1Q13526 163 aaPredicted RBP20.48■□□□□ 0.87
PTPN13-205ENST00000502971 ZNHIT3Q15649 155 aaPredicted RBP20.48■□□□□ 0.87
PTPN13-205ENST00000502971 CTU2Q2VPK5 515 aaKnown RBP20.48■□□□□ 0.87
PTPN13-205ENST00000502971 PERM1Q5SV97 790 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 AP1ARQ63HQ0 302 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 LINC00471Q8N535 108 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 AQP11Q8NBQ7 271 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 DPYSL5Q9BPU6 564 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 FUZQ9BT04 418 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 FGF21Q9NSA1 209 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 BLOC1S6Q9UL45 172 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 SLC6A14Q9UN76 642 aa20.48■□□□□ 0.87
PTPN13-205ENST00000502971 ARID1BQ8NFD5 2236 aaPredicted RBP20.48■□□□□ 0.87
PTPN13-205ENST00000502971 AGAP5A6NIR3 686 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 DSCR3O14972 297 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 CPNE6O95741 557 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 CER1O95813 267 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 ADAP00813 363 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 MAOAP21397 527 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 FUT4P22083 530 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 RPS4Y1P22090 263 aaKnown RBP20.47■□□□□ 0.87
PTPN13-205ENST00000502971 CRHBPP24387 322 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 ALDH3B2P48448 385 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 NUP107P57740 925 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 NPTX1Q15818 432 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 NADK2Q4G0N4 442 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 EIPR1Q53HC9 387 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 PIK3R3Q92569 461 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 ADNPQ9H2P0 1102 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 FOLH1BQ9HBA9 442 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 LANCL2Q9NS86 450 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 MGAT4BQ9UQ53 548 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 CHST2Q9Y4C5 530 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 PCDHGA5Q9Y5G8 931 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF318Q5VUA4 2279 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 GASTP01350 101 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 DBIP07108 87 aaKnown RBP20.47■□□□□ 0.87
PTPN13-205ENST00000502971 IL7RP16871 459 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 EMDP50402 254 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 GABARAPL2P60520 117 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 CDK5R2Q13319 367 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 DSG2Q14126 1118 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 CCNJQ5T5M9 372 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 SLC23A3Q6PIS1 610 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF574Q6ZN55 896 aaPredicted RBP20.47■□□□□ 0.87
PTPN13-205ENST00000502971 EID2Q8N6I1 236 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 OR4D9Q8NGE8 314 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 YIPF2Q9BWQ6 316 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms