RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 ARHGAP11BQ3KRB8 267 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 DCST2Q5T1A1 773 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 TCTN3Q6NUS6 607 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 C16orf47Q6ZP98 133 aaPredicted RBP16.89■□□□□ 0.29
RGP1-202ENST00000496906 C16orf62Q7Z3J2 963 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 MICU2Q8IYU8 434 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 ARMC10Q8N2F6 343 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 CLEC1AQ8NC01 280 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 NFKBIDQ8NI38 313 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 HSPBAP1Q96EW2 488 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 RMND5BQ96G75 393 aaPredicted RBP16.89■□□□□ 0.29
RGP1-202ENST00000496906 TMEM19Q96HH6 336 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 THOC3Q96J01 351 aaKnown RBP16.89■□□□□ 0.29
RGP1-202ENST00000496906 LMF1Q96S06 567 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 CBLCQ9ULV8 474 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 LIPT1Q9Y234 373 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 RAXQ9Y2V3 346 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 OR10H1Q9Y4A9 318 aa16.89■□□□□ 0.29
RGP1-202ENST00000496906 IGF2RP11717 2491 aa16.88■□□□□ 0.29
RGP1-202ENST00000496906 KCNK2O95069 426 aa16.88■□□□□ 0.29
RGP1-202ENST00000496906 MSX2P35548 267 aaPredicted RBP16.88■□□□□ 0.29
RGP1-202ENST00000496906 PSPHP78330 225 aa16.88■□□□□ 0.29
RGP1-202ENST00000496906 MRPS22P82650 360 aaKnown RBP16.88■□□□□ 0.29
RGP1-202ENST00000496906 CYP27C1Q4G0S4 372 aa16.88■□□□□ 0.29
RGP1-202ENST00000496906 H3F3CQ6NXT2 135 aa16.88■□□□□ 0.29
RGP1-202ENST00000496906 JMJD6Q6NYC1 403 aaPredicted RBP16.88■□□□□ 0.29
RGP1-202ENST00000496906 CCDC81Q6ZN84 652 aa16.88■□□□□ 0.29
RGP1-202ENST00000496906 PTRH1Q86Y79 214 aaKnown RBP16.88■□□□□ 0.29
RGP1-202ENST00000496906 METTL25Q8N6Q8 603 aa16.88■□□□□ 0.29
RGP1-202ENST00000496906 ANKFN1Q8N957 763 aa16.88■□□□□ 0.29
RGP1-202ENST00000496906 BRIX1Q8TDN6 353 aaKnown RBP16.88■□□□□ 0.29
RGP1-202ENST00000496906 PSMF1Q92530 271 aa16.88■□□□□ 0.29
RGP1-202ENST00000496906 CCDC124Q96CT7 223 aaKnown RBP16.88■□□□□ 0.29
RGP1-202ENST00000496906 TRNT1Q96Q11 434 aaKnown RBP16.88■□□□□ 0.29
RGP1-202ENST00000496906 SUCOQ9UBS9 1254 aaKnown RBP16.88■□□□□ 0.29
RGP1-202ENST00000496906 SLC7A8Q9UHI5 535 aa16.88■□□□□ 0.29
RGP1-202ENST00000496906 CHD8Q9HCK8 2581 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 TMEM247A6NEH6 219 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 WWP2O00308 870 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 SLC28A2O43868 658 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 ZNF354AO60765 605 aaPredicted RBP16.87■□□□□ 0.29
RGP1-202ENST00000496906 NADKO95544 446 aaPredicted RBP16.87■□□□□ 0.29
RGP1-202ENST00000496906 CHRM4P08173 479 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 NR2F1P10589 423 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 ITGA3P26006 1051 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 CRISP3P54108 245 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 FOXK2Q01167 660 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 BNIP2Q12982 314 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 VEZF1Q14119 521 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 CCNJQ5T5M9 372 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 FIGNL1Q6PIW4 674 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 PROSER1Q86XN7 944 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 SLC5A8Q8N695 610 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 BCORP1Q8N888 145 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 HIPK4Q8NE63 616 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 TNIP2Q8NFZ5 429 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 FAM110BQ8TC76 370 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 SDF2Q99470 211 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 ZNF350Q9GZX5 532 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 ING2Q9H160 280 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 RUBCNLQ9H714 662 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 EGFL7Q9UHF1 273 aa16.87■□□□□ 0.29
RGP1-202ENST00000496906 URB1O60287 2271 aaKnown RBP16.87■□□□□ 0.29
RGP1-202ENST00000496906 LAMA5O15230 3695 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 A8MUI8 341 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 ZIC2O95409 532 aaPredicted RBP16.86■□□□□ 0.29
RGP1-202ENST00000496906 H6PDO95479 791 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 IGKV1D-16P01601 117 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 ABCD3P28288 659 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 NRG3P56975 720 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 SOX8P57073 446 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 TRIM25Q14258 630 aaKnown RBP16.86■□□□□ 0.29
RGP1-202ENST00000496906 GNA13Q14344 377 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 GPAT3Q53EU6 434 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 FCRLBQ6BAA4 426 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 REEP3Q6NUK4 255 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 LRRC69Q6ZNQ3 347 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 LRRC74BQ6ZQY2 392 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 OLIG3Q7RTU3 272 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 RPS19BP1Q86WX3 136 aaKnown RBP16.86■□□□□ 0.29
RGP1-202ENST00000496906 SLC30A8Q8IWU4 369 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 PRR22Q8IZ63 422 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 TAGAPQ8N103 731 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 SLC34A3Q8N130 599 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 SIRT6Q8N6T7 355 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 TMBIM1Q969X1 311 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 LHPPQ9H008 270 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 PCDHAC1Q9H158 963 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 ANGPT4Q9Y264 503 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 ZNF451Q9Y4E5 1061 aa16.86■□□□□ 0.29
RGP1-202ENST00000496906 C5orf58C9J3I9 102 aa16.85■□□□□ 0.29
RGP1-202ENST00000496906 ANKRD65E5RJM6 399 aa16.85■□□□□ 0.29
RGP1-202ENST00000496906 TAF4O00268 1085 aa16.85■□□□□ 0.29
RGP1-202ENST00000496906 MAN1A2O60476 641 aa16.85■□□□□ 0.29
RGP1-202ENST00000496906 ITGA10O75578 1167 aa16.85■□□□□ 0.29
RGP1-202ENST00000496906 OR2J2O76002 312 aa16.85■□□□□ 0.29
RGP1-202ENST00000496906 NQO1P15559 274 aaKnown RBP16.85■□□□□ 0.29
RGP1-202ENST00000496906 GGT1P19440 569 aa16.85■□□□□ 0.29
RGP1-202ENST00000496906 PCBP3P57721 371 aaKnown RBP16.85■□□□□ 0.29
RGP1-202ENST00000496906 MLF1P58340 268 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms